RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 BOLA2Q9H3K6 86 aa16.07■□□□□ 0.16
SUPT5H-220ENST00000601978 PRDM6Q9NQX0 595 aa16.07■□□□□ 0.16
SUPT5H-220ENST00000601978 FAM184BQ9ULE4 1060 aa16.07■□□□□ 0.16
SUPT5H-220ENST00000601978 TTC28Q96AY4 2481 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 ELP1O95163 1332 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 SYNRGQ9UMZ2 1314 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 ATP2A1O14983 1001 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 DUSP11O75319 330 aaKnown RBP16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 TIMP1P01033 207 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 DNAJB2P25686 324 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 CST5P28325 142 aaPredicted RBP16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 ZNF467Q7Z7K2 595 aaPredicted RBP16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 SIRT2Q8IXJ6 389 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 STARD7Q9NQZ5 370 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 TBX21Q9UL17 535 aa16.06■□□□□ 0.16
SUPT5H-220ENST00000601978 VCANP13611 3396 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 APBB1O00213 710 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 MS4A1P11836 297 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 CDK7P50613 346 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 GRIN2CQ14957 1233 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 KCNA10Q16322 511 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 LENG1Q96BZ8 264 aaPredicted RBP16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 SLF1Q9BQI6 1058 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 NYAP2Q9P242 653 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 SLC4A4Q9Y6R1 1079 aa16.05■□□□□ 0.16
SUPT5H-220ENST00000601978 MROH7Q68CQ1 1323 aa16.04■□□□□ 0.16
SUPT5H-220ENST00000601978 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
SUPT5H-220ENST00000601978 MFSD5Q6N075 450 aa16.04■□□□□ 0.16
SUPT5H-220ENST00000601978 PRPF38AQ8NAV1 312 aaKnown RBP16.04■□□□□ 0.16
SUPT5H-220ENST00000601978 DDX11Q96FC9 970 aa16.04■□□□□ 0.16
SUPT5H-220ENST00000601978 ZNF576Q9H609 170 aa16.04■□□□□ 0.16
SUPT5H-220ENST00000601978 ZBTB40Q9NUA8 1239 aa16.04■□□□□ 0.16
SUPT5H-220ENST00000601978 ARPP21Q9UBL0 812 aaPredicted RBP16.04■□□□□ 0.16
SUPT5H-220ENST00000601978 EYSQ5T1H1 3165 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 F5H6K3 240 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 CHGBP05060 677 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 KLRC3Q07444 240 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 PPIGQ13427 754 aaKnown RBP eCLIP16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 RASIP1Q5U651 963 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 ZSCAN25Q6NSZ9 544 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 CCDC174Q6PII3 467 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 PCSK9Q8NBP7 692 aaKnown RBP16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 GLT1D1Q96MS3 346 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.03■□□□□ 0.163e-6■■□□□ 11.4
SUPT5H-220ENST00000601978 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 UPF3AQ9H1J1 476 aaKnown RBP16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 RIPK3Q9Y572 518 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 PRUNE2Q8WUY3 3088 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 GREB1LQ9C091 1923 aaPredicted RBP16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 CDH23Q9H251 3354 aa16.03■□□□□ 0.16
SUPT5H-220ENST00000601978 NDUFB10O96000 172 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 RASA1P20936 1047 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 NKX3-2P78367 333 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 ACVR2BQ13705 512 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 TJAP1Q5JTD0 557 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 TMEM240Q5SV17 173 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 TIFAQ96CG3 184 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 STRBPQ96SI9 672 aaKnown RBP16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 ABHD16BQ9H3Z7 469 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 DDX19BQ9UMR2 479 aa16.02■□□□□ 0.16
SUPT5H-220ENST00000601978 MYO9BQ13459 2157 aa16.02■□□□□ 0.15
SUPT5H-220ENST00000601978 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 RAD21O60216 631 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 ZBED4O75132 1171 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 ASGR1P07306 291 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 GJA9P57773 515 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 C16orf59Q7L2K0 433 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 USP38Q8NB14 1042 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 SPC25Q9HBM1 224 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 SLC38A10Q9HBR0 1119 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 SYNPO2Q9UMS6 1093 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 MYH7P12883 1935 aa16.01■□□□□ 0.15
SUPT5H-220ENST00000601978 SPTBN5Q9NRC6 3674 aaKnown RBP16■□□□□ 0.15
SUPT5H-220ENST00000601978 IGKV6D-41A0A0C4DH26 115 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 A0A0U1RQG5 324 aaPredicted RBP16■□□□□ 0.15
SUPT5H-220ENST00000601978 GSG1L2A8MUP6 293 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 ARVCFO00192 962 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 ADCY6O43306 1168 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 C6orf222P0C671 652 aaPredicted RBP16■□□□□ 0.15
SUPT5H-220ENST00000601978 OAZ1P54368 228 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 CCDC144BQ3MJ40 725 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 AKNAD1Q5T1N1 836 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 CHST13Q8NET6 341 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 MKL1Q969V6 931 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 FGD4Q96M96 766 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 MKNK2Q9HBH9 465 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 FBXO40Q9UH90 709 aa16■□□□□ 0.15
SUPT5H-220ENST00000601978 IRX5P78411 483 aaPredicted RBP15.99■□□□□ 0.15
SUPT5H-220ENST00000601978 GNASQ5JWF2 1037 aa15.99■□□□□ 0.15
SUPT5H-220ENST00000601978 FAM126BQ8IXS8 530 aa15.99■□□□□ 0.15
SUPT5H-220ENST00000601978 CPXCR1Q8N123 301 aa15.99■□□□□ 0.15
SUPT5H-220ENST00000601978 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
SUPT5H-220ENST00000601978 CHMP4BQ9H444 224 aaKnown RBP15.99■□□□□ 0.15
SUPT5H-220ENST00000601978 CLIP2Q9UDT6 1046 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms