RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CREG2Q8IUH2 290 aa5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 C7orf61Q8IZ16 206 aa5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 PI4K2BQ8TCG2 481 aa5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 SYTL5Q8TDW5 730 aaPredicted RBP5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 CARS2Q9HA77 564 aaKnown RBP5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 PRKAG3Q9UGI9 489 aa5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 FBXL21Q9UKT6 434 aa5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 PCDHB12Q9Y5F1 795 aa5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 ADCY10Q96PN6 1610 aa5.65□□□□□ -1.51
CKS1BP3-201ENST00000600888 MAPKBP1O60336 1514 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 UGGT2Q9NYU1 1516 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 SHOXO15266 292 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 SIGLEC6O43699 453 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 SLC7A5Q01650 507 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 TNNI3KQ59H18 835 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 DCAF15Q66K64 600 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 SLC23A3Q6PIS1 610 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 DAGLBQ8NCG7 672 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 HDAC8Q9BY41 377 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 TANGO6Q9C0B7 1094 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 PRDM7Q9NQW5 492 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 MBNL3Q9NUK0 354 aaKnown RBP5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 FAM86C1Q9NVL1 165 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 DUSP13Q9UII6 198 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 CARMIL2Q6F5E8 1435 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 PRXQ9BXM0 1461 aa5.64□□□□□ -1.51
CKS1BP3-201ENST00000600888 PRAMEF1O95521 474 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 RNASE1P07998 156 aaKnown RBP5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 CD247P20963 164 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 ZNF792Q3KQV3 632 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 XP32Q5T750 250 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 USHBP1Q8N6Y0 703 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 ZNF655Q8N720 491 aaPredicted RBP5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 KLHL6Q8WZ60 621 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 CHST7Q9NS84 486 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 GFOD1Q9NXC2 390 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 ACTR10Q9NZ32 417 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 PRR13Q9NZ81 148 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 ADGRE2Q9UHX3 823 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 ADAMTS6Q9UKP5 1117 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 MINPP1Q9UNW1 487 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 ZNF451Q9Y4E5 1061 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 DISP1Q96F81 1524 aa5.63□□□□□ -1.51
CKS1BP3-201ENST00000600888 ATP2B1P20020 1258 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 LTKP29376 864 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 EGR3Q06889 387 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 NOL9Q5SY16 702 aaKnown RBP5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 KIAA1211LQ6NV74 962 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 VHLLQ6RSH7 139 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 CBLL1Q75N03 491 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 TCTN2Q96GX1 697 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 HAUS7Q99871 368 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 GP6Q9HCN6 339 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 PCDHA11Q9Y5I1 949 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 TNIKQ9UKE5 1360 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 EEA1Q15075 1411 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 KIAA0556O60303 1618 aa5.62□□□□□ -1.51
CKS1BP3-201ENST00000600888 UHRF1BP1LA0JNW5 1464 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 CBFA2T2O43439 604 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 PTPRGP23470 1445 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 ZNF445P59923 1031 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 TCEAL1Q15170 157 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 ABCC10Q5T3U5 1492 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 HEATR6Q6AI08 1181 aaKnown RBP5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 ANKS3Q6ZW76 656 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 LINC00116Q8NCU8 138 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 BRF1Q92994 677 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 ALPK1Q96QP1 1244 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 DIP2BQ9P265 1576 aa5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 R3HCC1Q9Y3T6 440 aaKnown RBP5.61□□□□□ -1.51
CKS1BP3-201ENST00000600888 A0A087WZG4 1122 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 MEIS1O00470 390 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 KLF4O43474 513 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 STK10O94804 968 aaKnown RBP5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 EPHX1P07099 455 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 CTSKP43235 329 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 NCAPHQ15003 741 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 FXNQ16595 210 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 LARP1BQ659C4 914 aaKnown RBP5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 LRRN4CLQ8ND94 238 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 HNRNPLLQ8WVV9 542 aaKnown RBP5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 KLHL25Q9H0H3 589 aa5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 RC3H2Q9HBD1 1191 aaKnown RBP5.6□□□□□ -1.51
CKS1BP3-201ENST00000600888 ABCC2Q92887 1545 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 GOLGA3Q08378 1498 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 DNAJC25-GNG10A0A024R161 153 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 SSU72P8A0A1W2PR75 194 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 ITGA4P13612 1032 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 IRAK1P51617 712 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 PCBP3P57721 371 aaKnown RBP5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 TEKQ02763 1124 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 RALGPS1Q5JS13 557 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 C6orf15Q6UXA7 325 aaPredicted RBP5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 RNF111Q6ZNA4 994 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 ADAT2Q7Z6V5 191 aaKnown RBP5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 FAM178BQ8IXR5 827 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 MICAL1Q8TDZ2 1067 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 FGD4Q96M96 766 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 DSCC1Q9BVC3 393 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 FOXP3Q9BZS1 431 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms