RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 ZSCAN26Q16670 478 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 HHATQ5VTY9 493 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 MED4Q9NPJ6 270 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 ARMCX3Q9UH62 379 aaPredicted RBP16.01■□□□□ 0.15
SYMPK-215ENST00000600237 STK10O94804 968 aaKnown RBP16.01■□□□□ 0.15
SYMPK-215ENST00000600237 NAA25Q14CX7 972 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 LMNTD2Q8IXW0 634 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 PCDHB13Q9Y5F0 798 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 IVNS1ABPQ9Y6Y0 642 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 IKBKBO14920 756 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 GOLGA5Q8TBA6 731 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 SHROOM2Q13796 1616 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 ZBED4O75132 1171 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 CFBP00751 764 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 TRAPPC10P48553 1259 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 RAD51AP2Q09MP3 1159 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 ADCK5Q3MIX3 580 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 SMC1BQ8NDV3 1235 aa16.01■□□□□ 0.15
SYMPK-215ENST00000600237 LSM14BQ9BX40 385 aaKnown RBP16.01■□□□□ 0.15
SYMPK-215ENST00000600237 DBNLQ9UJU6 430 aaKnown RBP16■□□□□ 0.15
SYMPK-215ENST00000600237 GYG1P46976 350 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 RABGGTAQ92696 567 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 METTL14Q9HCE5 456 aaKnown RBP16■□□□□ 0.15
SYMPK-215ENST00000600237 PCDHA5Q9Y5H7 936 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
SYMPK-215ENST00000600237 TRIM37O94972 964 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 ERCC3P19447 782 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 MRPS9P82933 396 aaKnown RBP16■□□□□ 0.15
SYMPK-215ENST00000600237 ZNF827Q17R98 1081 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 CFAP57Q96MR6 1250 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 FOXP1Q9H334 677 aaPredicted RBP16■□□□□ 0.15
SYMPK-215ENST00000600237 PCDHA12Q9UN75 941 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 EPN1Q9Y6I3 576 aaPredicted RBP16■□□□□ 0.15
SYMPK-215ENST00000600237 NOL3O60936 208 aaKnown RBP16■□□□□ 0.15
SYMPK-215ENST00000600237 CHRNDQ07001 517 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 GPBP1Q86WP2 473 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 CUEDC2Q9H467 287 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 KIF1BO60333 1816 aa16■□□□□ 0.15
SYMPK-215ENST00000600237 LONRF2Q1L5Z9 754 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 CHURC1Q8WUH1 139 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 BIN2Q9UBW5 565 aaPredicted RBP15.99■□□□□ 0.15
SYMPK-215ENST00000600237 MYCLP12524 364 aaPredicted RBP15.99■□□□□ 0.15
SYMPK-215ENST00000600237 ITIH3Q06033 890 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 BRDTQ58F21 947 aaPredicted RBP15.99■□□□□ 0.15
SYMPK-215ENST00000600237 CCDC62Q6P9F0 684 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 MCUR1Q96AQ8 359 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 MYO1AQ9UBC5 1043 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 GOLGA8KD6RF30 607 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 GAS7O60861 476 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 PDE8BO95263 885 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 RPN1P04843 607 aaKnown RBP15.99■□□□□ 0.15
SYMPK-215ENST00000600237 CYP21A2P08686 494 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 KRT15P19012 456 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 GBP1P32455 592 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 HSPA1LP34931 641 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 PPP1R21Q6ZMI0 780 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 BRINP3Q76B58 766 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 SPATS2Q86XZ4 545 aaKnown RBP15.99■□□□□ 0.15
SYMPK-215ENST00000600237 RNF26Q9BY78 433 aaPredicted RBP15.99■□□□□ 0.15
SYMPK-215ENST00000600237 ANTXR1Q9H6X2 564 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 THRAP3Q9Y2W1 955 aaKnown RBP15.99■□□□□ 0.15
SYMPK-215ENST00000600237 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 KLRF2D3W0D1 207 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 ATP8B1O43520 1251 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 RNF40O75150 1001 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 PCK1P35558 622 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 USH1GQ495M9 461 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 HOMER3Q9NSC5 361 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 CLIC4Q9Y696 253 aa15.99■□□□□ 0.15
SYMPK-215ENST00000600237 RGS16O15492 202 aaPredicted RBP15.98■□□□□ 0.15
SYMPK-215ENST00000600237 N4BP1O75113 896 aaKnown RBP15.98■□□□□ 0.15
SYMPK-215ENST00000600237 CTNNA1P35221 906 aaKnown RBP15.98■□□□□ 0.15
SYMPK-215ENST00000600237 APBA1Q02410 837 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 PNMA8AQ86V59 439 aaPredicted RBP15.98■□□□□ 0.15
SYMPK-215ENST00000600237 SLFN12Q8IYM2 578 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 U2AF1L4Q8WU68 220 aaKnown RBP15.98■□□□□ 0.15
SYMPK-215ENST00000600237 RCOR1Q9UKL0 485 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 KDM6BO15054 1643 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 ARAP3Q8WWN8 1544 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 BCAMP50895 628 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 PTGDRQ13258 359 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 ARHGAP44Q17R89 818 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 TSNAXIP1Q2TAA8 658 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 CEP85LQ5SZL2 805 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 NSUN7Q8NE18 718 aaKnown RBP15.98■□□□□ 0.15
SYMPK-215ENST00000600237 CLIC6Q96NY7 704 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 GMNNO75496 209 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 APOA5Q6Q788 366 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 VPS52Q8N1B4 723 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 TSC1Q92574 1164 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 P3H4Q92791 437 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 DDX23Q9BUQ8 820 aaKnown RBP15.98■□□□□ 0.15
SYMPK-215ENST00000600237 GREM2Q9H772 168 aa15.98■□□□□ 0.15
SYMPK-215ENST00000600237 CDC23Q9UJX2 597 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms