RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 IRX6P78412 446 aaPredicted RBP18.03■□□□□ 0.48
TGFB1-202ENST00000597453 MDM2Q00987 491 aaPredicted RBP18.03■□□□□ 0.48
TGFB1-202ENST00000597453 PDE4BQ07343 736 aa18.03■□□□□ 0.48
TGFB1-202ENST00000597453 PRPF38AQ8NAV1 312 aaKnown RBP18.03■□□□□ 0.48
TGFB1-202ENST00000597453 KIFC2Q96AC6 838 aa18.03■□□□□ 0.48
TGFB1-202ENST00000597453 RWDD1Q9H446 243 aaPredicted RBP18.03■□□□□ 0.48
TGFB1-202ENST00000597453 DIS3Q9Y2L1 958 aaKnown RBP18.03■□□□□ 0.48
TGFB1-202ENST00000597453 KBTBD13C9JR72 458 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 TSPY3P0CV98 308 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 TSPY8P0CW00 308 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 RTP1P59025 263 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 TFAP4Q01664 338 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 LRRC41Q15345 812 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 VPS53Q5VIR6 699 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 TDHQ8IZJ6 230 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 CPXCR1Q8N123 301 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 GMCL1P1Q8NEA9 526 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 INCENPQ9NQS7 918 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 SYNPO2Q9UMS6 1093 aa18.02■□□□□ 0.48
TGFB1-202ENST00000597453 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.02■□□□□ 0.48
TGFB1-202ENST00000597453 ATP2A1O14983 1001 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 SLC3A2P08195 630 aaKnown RBP18.01■□□□□ 0.47
TGFB1-202ENST00000597453 SLC4A3P48751 1232 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 PDE1AP54750 535 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 CTDSPL2Q05D32 466 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 SLFN13Q68D06 897 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 SLC39A5Q6ZMH5 540 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 LENG1Q96BZ8 264 aaPredicted RBP18.01■□□□□ 0.47
TGFB1-202ENST00000597453 SLC38A10Q9HBR0 1119 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 RAVER2Q9HCJ3 691 aaKnown RBP18.01■□□□□ 0.47
TGFB1-202ENST00000597453 XPNPEP3Q9NQH7 507 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 NRBP1Q9UHY1 535 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 FEM1BQ9UK73 627 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 ATP11BQ9Y2G3 1177 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 TACC3Q9Y6A5 838 aa18.01■□□□□ 0.47
TGFB1-202ENST00000597453 DNAJC25-GNG10A0A024R161 153 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 ZBED4O75132 1171 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 ZNF865P0CJ78 1059 aaPredicted RBP18■□□□□ 0.47
TGFB1-202ENST00000597453 BMP3P12645 472 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 ADCYAP1R1P41586 468 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 SMC5Q8IY18 1101 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 FERMT2Q96AC1 680 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 CHMP4CQ96CF2 233 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 EVI5LQ96CN4 794 aa18■□□□□ 0.47
TGFB1-202ENST00000597453 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
TGFB1-202ENST00000597453 IGHDP01880 384 aa17.99■□□□□ 0.47
TGFB1-202ENST00000597453 RARBP10826 455 aa17.99■□□□□ 0.47
TGFB1-202ENST00000597453 SNX17Q15036 470 aa17.99■□□□□ 0.47
TGFB1-202ENST00000597453 TRIM60Q495X7 471 aa17.99■□□□□ 0.47
TGFB1-202ENST00000597453 DDX11Q96FC9 970 aa17.99■□□□□ 0.47
TGFB1-202ENST00000597453 TMEM232C9JQI7 657 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 NMT2O60551 498 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 SNAI1O95863 264 aaPredicted RBP17.98■□□□□ 0.47
TGFB1-202ENST00000597453 PGK1P00558 417 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 RASGRP2Q7LDG7 609 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 FAM227BQ96M60 508 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 FGD4Q96M96 766 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 IL17RBQ9NRM6 502 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 PHF24Q9UPV7 400 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 CNPY2Q9Y2B0 182 aa17.98■□□□□ 0.47
TGFB1-202ENST00000597453 CTDP1Q9Y5B0 961 aaPredicted RBP17.98■□□□□ 0.47
TGFB1-202ENST00000597453 A0A0D9SFI3 127 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 AKR1A1P14550 325 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 OAZ1P54368 228 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.97■□□□□ 0.47
TGFB1-202ENST00000597453 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
TGFB1-202ENST00000597453 GMCL1Q96IK5 515 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 HELLSQ9NRZ9 838 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 ANAPC4Q9UJX5 808 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 ISY1Q9ULR0 285 aaKnown RBP17.97■□□□□ 0.47
TGFB1-202ENST00000597453 STX8Q9UNK0 236 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 COL6A3P12111 3177 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
TGFB1-202ENST00000597453 TSPY2A6NKD2 308 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 ADAMTS4O75173 837 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 MCCP23508 829 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 SLC1A4P43007 532 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 STAT2P52630 851 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 Q7L0L9 218 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 RNF180Q86T96 592 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 LBHD1Q9BQE6 289 aaPredicted RBP17.96■□□□□ 0.47
TGFB1-202ENST00000597453 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 PRDM5Q9NQX1 630 aaPredicted RBP17.96■□□□□ 0.47
TGFB1-202ENST00000597453 HOMER2Q9NSB8 354 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 PRKAG2Q9UGJ0 569 aa17.96■□□□□ 0.47
TGFB1-202ENST00000597453 ZNF536O15090 1300 aa17.96■□□□□ 0.46
TGFB1-202ENST00000597453 C1orf53Q5VUE5 145 aa17.95■□□□□ 0.46
TGFB1-202ENST00000597453 GPR153Q6NV75 609 aa17.95■□□□□ 0.46
TGFB1-202ENST00000597453 KCTD1Q719H9 257 aa17.95■□□□□ 0.46
TGFB1-202ENST00000597453 ZNF467Q7Z7K2 595 aaPredicted RBP17.95■□□□□ 0.46
TGFB1-202ENST00000597453 CHST13Q8NET6 341 aa17.95■□□□□ 0.46
TGFB1-202ENST00000597453 STAG1Q8WVM7 1258 aa17.95■□□□□ 0.46
TGFB1-202ENST00000597453 PDLIM7Q9NR12 457 aa17.95■□□□□ 0.46
TGFB1-202ENST00000597453 FBXO40Q9UH90 709 aa17.95■□□□□ 0.46
TGFB1-202ENST00000597453 ZHX1Q9UKY1 873 aaPredicted RBP17.95■□□□□ 0.46
TGFB1-202ENST00000597453 SYNRGQ9UMZ2 1314 aa17.95■□□□□ 0.46
TGFB1-202ENST00000597453 LCTP09848 1927 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms