RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 LENG1Q96BZ8 264 aaPredicted RBP16.06■□□□□ 0.16
CAPNS1-213ENST00000592354 ATP11BQ9Y2G3 1177 aa16.06■□□□□ 0.16
CAPNS1-213ENST00000592354 MCM3APO60318 1980 aa16.06■□□□□ 0.16
CAPNS1-213ENST00000592354 LRRC37A2A6NM11 1700 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 SLC3A2P08195 630 aaKnown RBP16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 TAL1P17542 331 aaPredicted RBP16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 TFAP4Q01664 338 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 CTDSPL2Q05D32 466 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 VPS53Q5VIR6 699 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 RASGRP2Q7LDG7 609 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 PRPF38AQ8NAV1 312 aaKnown RBP16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 ARRDC4Q8NCT1 418 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 FERMT2Q96AC1 680 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 TINF2Q9BSI4 451 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 RAVER2Q9HCJ3 691 aaKnown RBP16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 XPNPEP3Q9NQH7 507 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 CTDP1Q9Y5B0 961 aaPredicted RBP16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 SMCHD1A6NHR9 2005 aa16.05■□□□□ 0.16
CAPNS1-213ENST00000592354 DNAH12Q6ZR08 3092 aa16.04■□□□□ 0.16
CAPNS1-213ENST00000592354 ADCYAP1R1P41586 468 aa16.04■□□□□ 0.16
CAPNS1-213ENST00000592354 LRRC41Q15345 812 aa16.04■□□□□ 0.16
CAPNS1-213ENST00000592354 TRIM60Q495X7 471 aa16.04■□□□□ 0.16
CAPNS1-213ENST00000592354 SLFN13Q68D06 897 aa16.04■□□□□ 0.16
CAPNS1-213ENST00000592354 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
CAPNS1-213ENST00000592354 NEDD1Q8NHV4 660 aa16.04■□□□□ 0.16
CAPNS1-213ENST00000592354 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
CAPNS1-213ENST00000592354 NMT2O60551 498 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 ZBED4O75132 1171 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 PGK1P00558 417 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 RARBP10826 455 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 BMP3P12645 472 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 PDE1AP54750 535 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 HDAC1Q13547 482 aaPredicted RBP16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 MKL1Q969V6 931 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 EVI5LQ96CN4 794 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 DDX11Q96FC9 970 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 SLC38A10Q9HBR0 1119 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 PRDM5Q9NQX1 630 aaPredicted RBP16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 HOMER2Q9NSB8 354 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 FEM1BQ9UK73 627 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 DIS3Q9Y2L1 958 aaKnown RBP16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 LAMA4Q16363 1823 aa16.03■□□□□ 0.16
CAPNS1-213ENST00000592354 A0A0D9SFI3 127 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 TSPY2A6NKD2 308 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 ZNF865P0CJ78 1059 aaPredicted RBP16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 IKQ13123 557 aaPredicted RBP16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 SLC39A5Q6ZMH5 540 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 LBHD1Q9BQE6 289 aaPredicted RBP16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 LNPKQ9C0E8 428 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 PRKAG2Q9UGJ0 569 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 SYNPO2Q9UMS6 1093 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 STX8Q9UNK0 236 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 CNPY2Q9Y2B0 182 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.16
CAPNS1-213ENST00000592354 LCTP09848 1927 aa16.02■□□□□ 0.15
CAPNS1-213ENST00000592354 DNAJC25-GNG10A0A024R161 153 aa16.01■□□□□ 0.15
CAPNS1-213ENST00000592354 TMEM232C9JQI7 657 aa16.01■□□□□ 0.15
CAPNS1-213ENST00000592354 ATP2A1O14983 1001 aa16.01■□□□□ 0.15
CAPNS1-213ENST00000592354 AKR1A1P14550 325 aa16.01■□□□□ 0.15
CAPNS1-213ENST00000592354 STAT2P52630 851 aa16.01■□□□□ 0.15
CAPNS1-213ENST00000592354 Q7L0L9 218 aa16.01■□□□□ 0.15
CAPNS1-213ENST00000592354 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
CAPNS1-213ENST00000592354 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
CAPNS1-213ENST00000592354 SYNRGQ9UMZ2 1314 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 RANBP6O60518 1105 aaKnown RBP16■□□□□ 0.15
CAPNS1-213ENST00000592354 MCCP23508 829 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 SLC1A4P43007 532 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 LRIT3Q3SXY7 679 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 KCTD1Q719H9 257 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 ANKRD35Q8N283 1001 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 GMCL1Q96IK5 515 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 FGD4Q96M96 766 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 IL17RBQ9NRM6 502 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 TOMM22Q9NS69 142 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 PHF24Q9UPV7 400 aa16■□□□□ 0.15
CAPNS1-213ENST00000592354 SYNGAP1Q96PV0 1343 aa15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 SNAI1O95863 264 aaPredicted RBP15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 SNAP25P60880 206 aa15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 SNX17Q15036 470 aa15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 B4GALNT3Q6L9W6 998 aa15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 RNF180Q86T96 592 aa15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 ZNF589Q86UQ0 364 aaPredicted RBP15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 DEFB123Q8N688 67 aa15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 PDLIM7Q9NR12 457 aa15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 HELLSQ9NRZ9 838 aa15.99■□□□□ 0.15
CAPNS1-213ENST00000592354 ZNF536O15090 1300 aa15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 A0A1W2PQ45 241 aaPredicted RBP15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 A0A1W2PQY0 241 aa15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 ADAMTS4O75173 837 aa15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 OAZ1P54368 228 aa15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 NMIQ13287 307 aaPredicted RBP15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 CCDC174Q6PII3 467 aa15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 MAMDC4Q6UXC1 1216 aa15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 SH3RF1Q7Z6J0 888 aa15.98■□□□□ 0.15
CAPNS1-213ENST00000592354 MSL3Q8N5Y2 521 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms