RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 ARMC9Q7Z3E5 817 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 WFDC8Q8IUA0 241 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 ALDH16A1Q8IZ83 802 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 MYD88Q99836 296 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 DDX60Q8IY21 1712 aaKnown RBP7.12□□□□□ -1.27
DNMT1-220ENST00000589351 TAF1P21675 1872 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 RTL9Q8NET4 1388 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 MYBBP1AQ9BQG0 1328 aaKnown RBP7.11□□□□□ -1.27
DNMT1-220ENST00000589351 LRRC37AA6NMS7 1700 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 USP17L5A8MUK1 530 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 ZBTB42B2RXF5 422 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 TM4SF4P48230 202 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 INHBEP58166 350 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 CCDC30Q5VVM6 783 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 RETREG2Q8NC44 543 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 ALG2Q9H553 416 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 AKTIPQ9H8T0 292 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 SEC31BQ9NQW1 1179 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 FRRS1LQ9P0K9 344 aa7.11□□□□□ -1.27
DNMT1-220ENST00000589351 UBE2Q2LH0YL09 131 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 ELL2O00472 640 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-220ENST00000589351 DLL1O00548 723 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 PPP1R12BO60237 982 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-220ENST00000589351 NOM1Q5C9Z4 860 aaKnown RBP7.1□□□□□ -1.27
DNMT1-220ENST00000589351 STRIP1Q5VSL9 837 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 RASAL3Q86YV0 1011 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 APOBEC3FQ8IUX4 373 aaKnown RBP7.1□□□□□ -1.27
DNMT1-220ENST00000589351 DHX37Q8IY37 1157 aaKnown RBP7.1□□□□□ -1.27
DNMT1-220ENST00000589351 GCC1Q96CN9 775 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 GMLQ99445 158 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 METTL22Q9BUU2 404 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-220ENST00000589351 COA1Q9GZY4 146 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 PHAXQ9H814 394 aaKnown RBP7.1□□□□□ -1.27
DNMT1-220ENST00000589351 BSDC1Q9NW68 430 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-220ENST00000589351 IFT57Q9NWB7 429 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 LEMD3Q9Y2U8 911 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 RNF114Q9Y508 228 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 DUOX1Q9NRD9 1551 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 ZNF609O15014 1411 aa7.1□□□□□ -1.27
DNMT1-220ENST00000589351 FKTNO75072 461 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 TBC1D8O95759 1140 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 IGHMBP2P38935 993 aaKnown RBP7.09□□□□□ -1.27
DNMT1-220ENST00000589351 KCNJ4P48050 445 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 CCT4P50991 539 aaKnown RBP7.09□□□□□ -1.27
DNMT1-220ENST00000589351 GP2P55259 537 aaKnown RBP7.09□□□□□ -1.27
DNMT1-220ENST00000589351 CLDN10P78369 228 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 INTS3Q68E01 1043 aaKnown RBP7.09□□□□□ -1.27
DNMT1-220ENST00000589351 TTLL5Q6EMB2 1281 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 OTUD7BQ6GQQ9 843 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 FBXO46Q6PJ61 603 aaPredicted RBP7.09□□□□□ -1.27
DNMT1-220ENST00000589351 ELMSAN1Q6PJG2 1045 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 TRIM50Q86XT4 487 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 ZNF296Q8WUU4 475 aaPredicted RBP7.09□□□□□ -1.27
DNMT1-220ENST00000589351 STK31Q9BXU1 1019 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 ANKRD2Q9GZV1 360 aa7.09□□□□□ -1.27
DNMT1-220ENST00000589351 MED23Q9ULK4 1368 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 ASTN2O75129 1339 aaPredicted RBP7.08□□□□□ -1.28
DNMT1-220ENST00000589351 KIAA1324LA8MWY0 1029 aaPredicted RBP7.08□□□□□ -1.28
DNMT1-220ENST00000589351 WNT10BO00744 389 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 MYO1BO43795 1136 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 GRNP28799 593 aaKnown RBP7.08□□□□□ -1.28
DNMT1-220ENST00000589351 CTSWP56202 376 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 DDX10Q13206 875 aaKnown RBP7.08□□□□□ -1.28
DNMT1-220ENST00000589351 FZD5Q13467 585 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 ARHGEF6Q15052 776 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 PCSK7Q16549 785 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 NBPF9Q3BBW0 867 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 KSR2Q6VAB6 950 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 FAM177A1Q8N128 213 aaPredicted RBP7.08□□□□□ -1.28
DNMT1-220ENST00000589351 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
DNMT1-220ENST00000589351 TTLL11Q8NHH1 800 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 TTC9Q92623 222 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 MPHOSPH8Q99549 860 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 ZFATQ9P243 1243 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 DMGDHQ9UI17 866 aaKnown RBP7.08□□□□□ -1.28
DNMT1-220ENST00000589351 MINPP1Q9UNW1 487 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 MAP3K2Q9Y2U5 619 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 PAPPA2Q9BXP8 1791 aa7.08□□□□□ -1.28
DNMT1-220ENST00000589351 PI4KAP2A4QPH2 592 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 MANSC4A6NHS7 340 aaPredicted RBP7.07□□□□□ -1.28
DNMT1-220ENST00000589351 UNCXA6NJT0 531 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 F8W735 103 aaPredicted RBP7.07□□□□□ -1.28
DNMT1-220ENST00000589351 APAF1O14727 1248 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 MAP3K6O95382 1288 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 TGFB1P01137 390 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 ZNF853P0CG23 659 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 DLGAP5Q15398 846 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 HIF1AQ16665 826 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 SUPT20HL1Q3ZLR7 823 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 DACT2Q5SW24 774 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 PRAMEF18Q5VWM3 479 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 IER5Q5VY09 327 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 MOB2Q70IA6 237 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 TMEM130Q8N3G9 435 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 PI4KAP1Q8N8J0 262 aa7.07□□□□□ -1.28
DNMT1-220ENST00000589351 JARID2Q92833 1246 aaPredicted RBP7.07□□□□□ -1.28
DNMT1-220ENST00000589351 C2orf49Q9BVC5 232 aaPredicted RBP7.07□□□□□ -1.28
DNMT1-220ENST00000589351 ANGEL1Q9UNK9 670 aaKnown RBP7.07□□□□□ -1.28
DNMT1-220ENST00000589351 ZNF804BA4D1E1 1349 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms