RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

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Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 LHX8Q68G74 356 aa27.59■■■□□ 2.01
LSM7-204ENST00000587502 CWC27Q6UX04 472 aaKnown RBP27.59■■■□□ 2.01
LSM7-204ENST00000587502 CHURC1Q8WUH1 139 aa27.59■■■□□ 2.01
LSM7-204ENST00000587502 KIFC2Q96AC6 838 aa27.59■■■□□ 2.01
LSM7-204ENST00000587502 INCENPQ9NQS7 918 aa27.59■■■□□ 2.01
LSM7-204ENST00000587502 IL17RBQ9NRM6 502 aa27.59■■■□□ 2.01
LSM7-204ENST00000587502 CEP290O15078 2479 aa27.58■■■□□ 2.01
LSM7-204ENST00000587502 CYP2C19P33261 490 aa27.58■■■□□ 2.01
LSM7-204ENST00000587502 SLC1A4P43007 532 aa27.58■■■□□ 2.01
LSM7-204ENST00000587502 NT5C2P49902 561 aa27.58■■■□□ 2.01
LSM7-204ENST00000587502 SNRNP48Q6IEG0 339 aaKnown RBP27.58■■■□□ 2.01
LSM7-204ENST00000587502 FAM160B2Q86V87 743 aa27.58■■■□□ 2.01
LSM7-204ENST00000587502 RNF41Q9H4P4 317 aaPredicted RBP27.58■■■□□ 2.01
LSM7-204ENST00000587502 SLC38A10Q9HBR0 1119 aa27.58■■■□□ 2.01
LSM7-204ENST00000587502 DIS3Q9Y2L1 958 aaKnown RBP27.58■■■□□ 2.01
LSM7-204ENST00000587502 H0YGN5 161 aa27.57■■■□□ 2
LSM7-204ENST00000587502 CNGA1P29973 690 aa27.57■■■□□ 2
LSM7-204ENST00000587502 NOVP48745 357 aa27.57■■■□□ 2
LSM7-204ENST00000587502 STAT2P52630 851 aa27.57■■■□□ 2
LSM7-204ENST00000587502 OAZ1P54368 228 aa27.57■■■□□ 2
LSM7-204ENST00000587502 MFSD6Q6ZSS7 791 aa27.57■■■□□ 2
LSM7-204ENST00000587502 C11orf49Q9H6J7 331 aa27.57■■■□□ 2
LSM7-204ENST00000587502 TCP11L1Q9NUJ3 509 aa27.57■■■□□ 2
LSM7-204ENST00000587502 EVI5O60447 810 aa27.56■■■□□ 2
LSM7-204ENST00000587502 PLA2G6O60733 806 aa27.56■■■□□ 2
LSM7-204ENST00000587502 RRP12Q5JTH9 1297 aaKnown RBP27.56■■■□□ 2
LSM7-204ENST00000587502 AKNAD1Q5T1N1 836 aa27.56■■■□□ 2
LSM7-204ENST00000587502 DIS3LQ8TF46 1054 aaKnown RBP27.56■■■□□ 2
LSM7-204ENST00000587502 STAG1Q8WVM7 1258 aa27.56■■■□□ 2
LSM7-204ENST00000587502 MAML3Q96JK9 1138 aa27.56■■■□□ 2
LSM7-204ENST00000587502 DDX20Q9UHI6 824 aaKnown RBP27.56■■■□□ 2
LSM7-204ENST00000587502 ISY1Q9ULR0 285 aaKnown RBP27.56■■■□□ 2
LSM7-204ENST00000587502 TMEM232C9JQI7 657 aa27.55■■■□□ 2
LSM7-204ENST00000587502 CYBAP13498 195 aa27.55■■■□□ 2
LSM7-204ENST00000587502 NRBP1Q9UHY1 535 aa27.55■■■□□ 2
LSM7-204ENST00000587502 TACC3Q9Y6A5 838 aa27.55■■■□□ 2
LSM7-204ENST00000587502 ZNF213O14771 459 aa27.54■■■□□ 2
LSM7-204ENST00000587502 NMT2O60551 498 aa27.54■■■□□ 2
LSM7-204ENST00000587502 MCCP23508 829 aa27.54■■■□□ 2
LSM7-204ENST00000587502 MNX1P50219 401 aaPredicted RBP27.54■■■□□ 2
LSM7-204ENST00000587502 HAND2P61296 217 aa27.54■■■□□ 2
LSM7-204ENST00000587502 IKQ13123 557 aaPredicted RBP27.54■■■□□ 2
LSM7-204ENST00000587502 RCSD1Q6JBY9 416 aa27.54■■■□□ 2
LSM7-204ENST00000587502 CPXCR1Q8N123 301 aa27.54■■■□□ 2
LSM7-204ENST00000587502 ZNFX1Q9P2E3 1918 aaKnown RBP27.54■■■□□ 2
LSM7-204ENST00000587502 FBXO40Q9UH90 709 aa27.54■■■□□ 2
LSM7-204ENST00000587502 PDE4AP27815 886 aa27.53■■■□□ 2
LSM7-204ENST00000587502 TTC22Q5TAA0 569 aa27.53■■■□□ 2
LSM7-204ENST00000587502 DSCC1Q9BVC3 393 aa27.53■■■□□ 2
LSM7-204ENST00000587502 TOP1P11387 765 aaKnown RBP27.52■■■□□ 2
LSM7-204ENST00000587502 ZNF792Q3KQV3 632 aa27.52■■■□□ 2
LSM7-204ENST00000587502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.52■■■□□ 2
LSM7-204ENST00000587502 CHST13Q8NET6 341 aa27.52■■■□□ 2
LSM7-204ENST00000587502 DCAF4Q8WV16 495 aa27.52■■■□□ 2
LSM7-204ENST00000587502 DDX11Q96FC9 970 aa27.52■■■□□ 2
LSM7-204ENST00000587502 TTC14Q96N46 770 aa27.52■■■□□ 2
LSM7-204ENST00000587502 RAVER2Q9HCJ3 691 aaKnown RBP27.52■■■□□ 2
LSM7-204ENST00000587502 CTNNA3Q9UI47 895 aa27.52■■■□□ 2
LSM7-204ENST00000587502 SEPT4O43236 478 aa27.51■■□□□ 1.99
LSM7-204ENST00000587502 PGK2P07205 417 aa27.51■■□□□ 1.99
LSM7-204ENST00000587502 MSL3Q8N5Y2 521 aaKnown RBP27.51■■□□□ 1.99
LSM7-204ENST00000587502 TRPV1Q8NER1 839 aa27.51■■□□□ 1.99
LSM7-204ENST00000587502 ESR2Q92731 530 aa27.51■■□□□ 1.99
LSM7-204ENST00000587502 RIPK3Q9Y572 518 aa27.51■■□□□ 1.99
LSM7-204ENST00000587502 SLC4A3P48751 1232 aa27.5■■□□□ 1.99
LSM7-204ENST00000587502 TINF2Q9BSI4 451 aa27.5■■□□□ 1.99
LSM7-204ENST00000587502 COL6A1P12109 1028 aa27.49■■□□□ 1.99
LSM7-204ENST00000587502 CCDC178Q5BJE1 867 aa27.49■■□□□ 1.99
LSM7-204ENST00000587502 HABP4Q5JVS0 413 aaKnown RBP27.49■■□□□ 1.99
LSM7-204ENST00000587502 KCTD1Q719H9 257 aa27.49■■□□□ 1.99
LSM7-204ENST00000587502 GSPT1P15170 499 aaKnown RBP27.48■■□□□ 1.99
LSM7-204ENST00000587502 IMMTQ16891 758 aaKnown RBP27.48■■□□□ 1.99
LSM7-204ENST00000587502 TKFCQ3LXA3 575 aa27.48■■□□□ 1.99
LSM7-204ENST00000587502 TBC1D10CQ8IV04 446 aa27.48■■□□□ 1.99
LSM7-204ENST00000587502 ANKRD35Q8N283 1001 aa27.48■■□□□ 1.99
LSM7-204ENST00000587502 ARRDC4Q8NCT1 418 aa27.48■■□□□ 1.99
LSM7-204ENST00000587502 RUFY2Q8WXA3 655 aa27.48■■□□□ 1.99
LSM7-204ENST00000587502 TMEM47Q9BQJ4 181 aa27.48■■□□□ 1.99
LSM7-204ENST00000587502 RAD50Q92878 1312 aa27.47■■□□□ 1.99
LSM7-204ENST00000587502 CCDC96Q2M329 555 aa27.47■■□□□ 1.99
LSM7-204ENST00000587502 DNAJC25-GNG10A0A024R161 153 aa27.46■■□□□ 1.99
LSM7-204ENST00000587502 DNM1LO00429 736 aa27.46■■□□□ 1.99
LSM7-204ENST00000587502 ZNF467Q7Z7K2 595 aaPredicted RBP27.46■■□□□ 1.99
LSM7-204ENST00000587502 IQCA1Q86XH1 822 aa27.46■■□□□ 1.99
LSM7-204ENST00000587502 CHMP4CQ96CF2 233 aa27.46■■□□□ 1.99
LSM7-204ENST00000587502 ACAD9Q9H845 621 aa27.46■■□□□ 1.99
LSM7-204ENST00000587502 PRR12Q9ULL5 1215 aa27.46■■□□□ 1.99
LSM7-204ENST00000587502 COLQQ9Y215 455 aaPredicted RBP27.46■■□□□ 1.99
LSM7-204ENST00000587502 MTMR7Q9Y216 660 aa27.46■■□□□ 1.99
LSM7-204ENST00000587502 CNPY2Q9Y2B0 182 aa27.46■■□□□ 1.99
LSM7-204ENST00000587502 PFASO15067 1338 aa27.45■■□□□ 1.99
LSM7-204ENST00000587502 SYNGAP1Q96PV0 1343 aa27.45■■□□□ 1.99
LSM7-204ENST00000587502 PLXNA1Q9UIW2 1896 aa27.45■■□□□ 1.99
LSM7-204ENST00000587502 NEFLP07196 543 aa27.45■■□□□ 1.98
LSM7-204ENST00000587502 PRAMEF19Q5SWL8 479 aa27.45■■□□□ 1.98
LSM7-204ENST00000587502 DGKHQ86XP1 1220 aa27.45■■□□□ 1.98
LSM7-204ENST00000587502 FRMPD3Q5JV73 1810 aa27.44■■□□□ 1.98
LSM7-204ENST00000587502 MAMDC4Q6UXC1 1216 aa27.44■■□□□ 1.98
LSM7-204ENST00000587502 BTNL9Q6UXG8 535 aa27.44■■□□□ 1.98
LSM7-204ENST00000587502 NEDD4P46934 1319 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms