RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 HDAC1Q13547 482 aaPredicted RBP16.73■□□□□ 0.27
HDAC5-203ENST00000586339 SNX17Q15036 470 aa16.73■□□□□ 0.27
HDAC5-203ENST00000586339 GJC2Q5T442 439 aaPredicted RBP16.73■□□□□ 0.27
HDAC5-203ENST00000586339 SNRNP48Q6IEG0 339 aaKnown RBP16.73■□□□□ 0.27
HDAC5-203ENST00000586339 TICAM2Q86XR7 235 aa16.73■□□□□ 0.27
HDAC5-203ENST00000586339 ZBED4O75132 1171 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 PGK2P07205 417 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 FDX1P10109 184 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 RARBP10826 455 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 OAZ1P54368 228 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 RTP1P59025 263 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 AAMPQ13685 434 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 C1orf53Q5VUE5 145 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 EVI5LQ96CN4 794 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 LRCH3Q96II8 777 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 SLC38A10Q9HBR0 1119 aa16.72■□□□□ 0.27
HDAC5-203ENST00000586339 SYNGAP1Q96PV0 1343 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 ATN1P54259 1190 aaPredicted RBP16.71■□□□□ 0.27
HDAC5-203ENST00000586339 LRRC41Q15345 812 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 FAM47AQ5JRC9 791 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 PRAMEF19Q5SWL8 479 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 ANKRD45Q5TZF3 282 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 ANO1Q5XXA6 986 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 SLC39A5Q6ZMH5 540 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 LRRC47Q8N1G4 583 aaKnown RBP16.71■□□□□ 0.27
HDAC5-203ENST00000586339 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 LBHD1Q9BQE6 289 aaPredicted RBP16.71■□□□□ 0.27
HDAC5-203ENST00000586339 XPNPEP3Q9NQH7 507 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 PRKAG2Q9UGJ0 569 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 FBXO40Q9UH90 709 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 CNPY2Q9Y2B0 182 aa16.71■□□□□ 0.27
HDAC5-203ENST00000586339 CTDP1Q9Y5B0 961 aaPredicted RBP16.71■□□□□ 0.27
HDAC5-203ENST00000586339 DNAJC25-GNG10A0A024R161 153 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 BMP3P12645 472 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 AKR1A1P14550 325 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 TFAP4Q01664 338 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 SLFN13Q68D06 897 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 MAMDC4Q6UXC1 1216 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 ZNF467Q7Z7K2 595 aaPredicted RBP16.7■□□□□ 0.26
HDAC5-203ENST00000586339 CHST13Q8NET6 341 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 KIFC2Q96AC6 838 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 DDX11Q96FC9 970 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 GMCL1Q96IK5 515 aa16.7■□□□□ 0.26
HDAC5-203ENST00000586339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDAC5-203ENST00000586339 FOXP2O15409 715 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 ZNF865P0CJ78 1059 aaPredicted RBP16.69■□□□□ 0.26
HDAC5-203ENST00000586339 STAT2P52630 851 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 PDE1AP54750 535 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 MDM2Q00987 491 aaPredicted RBP16.69■□□□□ 0.26
HDAC5-203ENST00000586339 RNF180Q86T96 592 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 FAM160B2Q86V87 743 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 ANAPC4Q9UJX5 808 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 PHF24Q9UPV7 400 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 ATP11BQ9Y2G3 1177 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 RIPK3Q9Y572 518 aa16.69■□□□□ 0.26
HDAC5-203ENST00000586339 TSPY2A6NKD2 308 aa16.68■□□□□ 0.26
HDAC5-203ENST00000586339 PLA2G6O60733 806 aa16.68■□□□□ 0.26
HDAC5-203ENST00000586339 ALX1Q15699 326 aa16.68■□□□□ 0.26
HDAC5-203ENST00000586339 CPXCR1Q8N123 301 aa16.68■□□□□ 0.26
HDAC5-203ENST00000586339 CHURC1Q8WUH1 139 aa16.68■□□□□ 0.26
HDAC5-203ENST00000586339 RAVER2Q9HCJ3 691 aaKnown RBP16.68■□□□□ 0.26
HDAC5-203ENST00000586339 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
HDAC5-203ENST00000586339 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
HDAC5-203ENST00000586339 ADCYAP1R1P41586 468 aa16.67■□□□□ 0.26
HDAC5-203ENST00000586339 SLC1A4P43007 532 aa16.67■□□□□ 0.26
HDAC5-203ENST00000586339 TRIM60Q495X7 471 aa16.67■□□□□ 0.26
HDAC5-203ENST00000586339 CCDC129Q6ZRS4 1044 aa16.67■□□□□ 0.26
HDAC5-203ENST00000586339 LAMA4Q16363 1823 aa16.67■□□□□ 0.26
HDAC5-203ENST00000586339 LRRC37A2A6NM11 1700 aa16.67■□□□□ 0.26
HDAC5-203ENST00000586339 TMEM232C9JQI7 657 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 ORC4O43929 436 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 ADAMTS4O75173 837 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 TAL1P17542 331 aaPredicted RBP16.66■□□□□ 0.26
HDAC5-203ENST00000586339 TKFCQ3LXA3 575 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 ANKRD35Q8N283 1001 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 STAG1Q8WVM7 1258 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 TSEN34Q9BSV6 310 aaKnown RBP16.66■□□□□ 0.26
HDAC5-203ENST00000586339 ACAD9Q9H845 621 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 FAM184BQ9ULE4 1060 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 STX8Q9UNK0 236 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 LCTP09848 1927 aa16.66■□□□□ 0.26
HDAC5-203ENST00000586339 SNAI1O95863 264 aaPredicted RBP16.65■□□□□ 0.26
HDAC5-203ENST00000586339 PGK1P00558 417 aa16.65■□□□□ 0.26
HDAC5-203ENST00000586339 FGRP09769 529 aa16.65■□□□□ 0.26
HDAC5-203ENST00000586339 NOVP48745 357 aa16.65■□□□□ 0.26
HDAC5-203ENST00000586339 CTDSPL2Q05D32 466 aa16.65■□□□□ 0.26
HDAC5-203ENST00000586339 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
HDAC5-203ENST00000586339 FERMT2Q96AC1 680 aa16.65■□□□□ 0.26
HDAC5-203ENST00000586339 ABHD16BQ9H3Z7 469 aa16.65■□□□□ 0.26
HDAC5-203ENST00000586339 PDLIM7Q9NR12 457 aa16.65■□□□□ 0.26
HDAC5-203ENST00000586339 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
HDAC5-203ENST00000586339 CUL9Q8IWT3 2517 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 A0A1W2PQ45 241 aaPredicted RBP16.64■□□□□ 0.25
HDAC5-203ENST00000586339 A0A1W2PQY0 241 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 MOXD2PA6NHM9 499 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 DUSP11O75319 330 aaKnown RBP16.64■□□□□ 0.25
HDAC5-203ENST00000586339 CST5P28325 142 aaPredicted RBP16.64■□□□□ 0.25
HDAC5-203ENST00000586339 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 IKQ13123 557 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms