RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SLFN13Q68D06 897 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 RCSD1Q6JBY9 416 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 MFSD6Q6ZSS7 791 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 FAM160B2Q86V87 743 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 CHURC1Q8WUH1 139 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 DEFB118Q96PH6 123 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 TEX13BQ9BXU2 312 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 OGDHLQ9ULD0 1010 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 DIS3Q9Y2L1 958 aaKnown RBP11.7□□□□□ -0.54
SKA2-208ENST00000583927 LCTP09848 1927 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 ZNF213O14771 459 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 FCER1AP12319 257 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 STAT2P52630 851 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 TRIM32Q13049 653 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 PLS1Q14651 629 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 CCL14Q16627 93 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 WDR78Q5VTH9 848 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 MFSD14CQ5VZR4 134 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 NCAPG2Q86XI2 1143 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
SKA2-208ENST00000583927 NPLOC4Q8TAT6 608 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 RUFY2Q8WXA3 655 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 NUP88Q99567 741 aaPredicted RBP11.69□□□□□ -0.54
SKA2-208ENST00000583927 INCENPQ9NQS7 918 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 STX8Q9UNK0 236 aa11.69□□□□□ -0.54
SKA2-208ENST00000583927 RAD21O60216 631 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 MSCO60682 206 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 ZBED4O75132 1171 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 FARP2O94887 1054 aaPredicted RBP11.68□□□□□ -0.54
SKA2-208ENST00000583927 TFRCP02786 760 aaKnown RBP11.68□□□□□ -0.54
SKA2-208ENST00000583927 TOP1P11387 765 aaKnown RBP11.68□□□□□ -0.54
SKA2-208ENST00000583927 SLC1A4P43007 532 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 CCDC178Q5BJE1 867 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 LHX8Q68G74 356 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 BTNL9Q6UXG8 535 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
SKA2-208ENST00000583927 DCAF4Q8WV16 495 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 ESR2Q92731 530 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 HTATIP2Q9BUP3 242 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 FLRT1Q9NZU1 646 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
SKA2-208ENST00000583927 NMT2O60551 498 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 COBLO75128 1261 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 CYBAP13498 195 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 CHMLP26374 656 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 HAND2P61296 217 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 IMMTQ16891 758 aaKnown RBP11.67□□□□□ -0.54
SKA2-208ENST00000583927 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
SKA2-208ENST00000583927 DGKHQ86XP1 1220 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 TBC1D10CQ8IV04 446 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 CHST13Q8NET6 341 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 MAML3Q96JK9 1138 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 MMP19Q99542 508 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 TMEM47Q9BQJ4 181 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 CNNM2Q9H8M5 875 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 FBXO40Q9UH90 709 aa11.67□□□□□ -0.54
SKA2-208ENST00000583927 DNAJC25-GNG10A0A024R161 153 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 TMEM232C9JQI7 657 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 SNHG28P0DPA3 235 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 MCCP23508 829 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
SKA2-208ENST00000583927 KCTD2Q14681 263 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 ZNF792Q3KQV3 632 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 TKFCQ3LXA3 575 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 RRP12Q5JTH9 1297 aaKnown RBP11.66□□□□□ -0.54
SKA2-208ENST00000583927 SNRNP48Q6IEG0 339 aaKnown RBP11.66□□□□□ -0.54
SKA2-208ENST00000583927 NECAB2Q7Z6G3 386 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 ZNF467Q7Z7K2 595 aaPredicted RBP11.66□□□□□ -0.54
SKA2-208ENST00000583927 IQCA1Q86XH1 822 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 KIFC2Q96AC6 838 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 IL25Q9H293 177 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 TOMM22Q9NS69 142 aa11.66□□□□□ -0.54
SKA2-208ENST00000583927 ZNF536O15090 1300 aa11.65□□□□□ -0.54
SKA2-208ENST00000583927 NEDD4P46934 1319 aa11.65□□□□□ -0.54
SKA2-208ENST00000583927 SGSM2O43147 1006 aa11.65□□□□□ -0.54
SKA2-208ENST00000583927 CCND3P30281 292 aaPredicted RBP11.65□□□□□ -0.54
SKA2-208ENST00000583927 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
SKA2-208ENST00000583927 MAMDC4Q6UXC1 1216 aa11.65□□□□□ -0.54
SKA2-208ENST00000583927 KRT23Q9C075 422 aa11.65□□□□□ -0.54
SKA2-208ENST00000583927 PNMA2Q9UL42 364 aa11.65□□□□□ -0.54
SKA2-208ENST00000583927 RIPK3Q9Y572 518 aa11.65□□□□□ -0.54
SKA2-208ENST00000583927 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
SKA2-208ENST00000583927 SYNGAP1Q96PV0 1343 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 LRRC37A2A6NM11 1700 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 SEPT4O43236 478 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 PDHBP11177 359 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 COL6A1P12109 1028 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 CYP2C19P33261 490 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 GPATCH4Q5T3I0 446 aaKnown RBP11.64□□□□□ -0.55
SKA2-208ENST00000583927 KCTD1Q719H9 257 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 TRPV1Q8NER1 839 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 PAWRQ96IZ0 340 aaKnown RBP11.64□□□□□ -0.55
SKA2-208ENST00000583927 TINF2Q9BSI4 451 aa11.64□□□□□ -0.55
SKA2-208ENST00000583927 RANBP17Q9H2T7 1088 aaKnown RBP11.64□□□□□ -0.55
SKA2-208ENST00000583927 DDX20Q9UHI6 824 aaKnown RBP11.64□□□□□ -0.55
SKA2-208ENST00000583927 PRR12Q9ULL5 1215 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms