RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	C9orf50	Q5SZB4	431 aa		11.44	□□□□□ -0.58
DDX42-215	ENST00000582985	SH3RF1	Q7Z6J0	888 aa		11.44	□□□□□ -0.58
DDX42-215	ENST00000582985	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX42-215	ENST00000582985	STRBP	Q96SI9	672 aa	Known RBP	11.44	□□□□□ -0.58
DDX42-215	ENST00000582985	RCAN3	Q9UKA8	241 aa		11.44	□□□□□ -0.58
DDX42-215	ENST00000582985	TRPC6	Q9Y210	931 aa		11.44	□□□□□ -0.58
DDX42-215	ENST00000582985	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.44	□□□□□ -0.58
DDX42-215	ENST00000582985	ROBO3	Q96MS0	1386 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	GREB1L	Q9C091	1923 aa	Predicted RBP	11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	GSG1L2	A8MUP6	293 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	PGK1	P00558	417 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	RASA1	P20936	1047 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	TLE2	Q04725	743 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	C20orf194	Q5TEA3	1177 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	ZNF697	Q5TEC3	545 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	GIMAP6	Q6P9H5	292 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	RNF180	Q86T96	592 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	STK11IP	Q8N1F8	1099 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	NUP88	Q99567	741 aa	Predicted RBP	11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	SLF1	Q9BQI6	1058 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	MKNK2	Q9HBH9	465 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	ECHDC1	Q9NTX5	307 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985	NYAP2	Q9P242	653 aa		11.43	□□□□□ -0.58
DDX42-215	ENST00000582985		A0A1W2PQ45	241 aa	Predicted RBP	11.42	□□□□□ -0.58
DDX42-215	ENST00000582985		A0A1W2PQY0	241 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	MINDY4B	A8MYZ0	360 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985		F5H6K3	240 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	NDUFB10	O96000	172 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	AKR1A1	P14550	325 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	KLRC3	Q07444	240 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	SNRNP48	Q6IEG0	339 aa	Known RBP	11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	KBTBD3	Q8NAB2	608 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	OSBP2	Q969R2	916 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	LENG1	Q96BZ8	264 aa	Predicted RBP	11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	KIF12	Q96FN5	646 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	TEX13B	Q9BXU2	312 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	CNPY2	Q9Y2B0	182 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	TACC3	Q9Y6A5	838 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	UNC80	Q8N2C7	3258 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	PLXNA1	Q9UIW2	1896 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	SMCHD1	A6NHR9	2005 aa		11.42	□□□□□ -0.58
DDX42-215	ENST00000582985	IGKV6D-41	A0A0C4DH26	115 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	ADAMTS4	O75173	837 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	CLTB	P09497	229 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	ITGB8	P26012	769 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	TSHZ3	Q63HK5	1081 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	RASEF	Q8IZ41	740 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	MSL3	Q8N5Y2	521 aa	Known RBP	11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	PRPF38A	Q8NAV1	312 aa	Known RBP	11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	APPBP2	Q92624	585 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	DDX11	Q96FC9	970 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	CLIP2	Q9UDT6	1046 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	RIPK3	Q9Y572	518 aa		11.41	□□□□□ -0.58
DDX42-215	ENST00000582985	SYNGAP1	Q96PV0	1343 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	SYNRG	Q9UMZ2	1314 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	DNAJC25-GNG10	A0A024R161	153 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	ATP2A1	O14983	1001 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	KIAA0355	O15063	1070 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	RNF113A	O15541	343 aa	Known RBP	11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	GPAA1	O43292	621 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	PQBP1	O60828	265 aa	Known RBP	11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	SNAI1	O95863	264 aa	Predicted RBP	11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	SLC4A3	P48751	1232 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	TDO2	P48775	406 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	SMAD3	P84022	425 aa	Known RBP	11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	MAMDC4	Q6UXC1	1216 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	CPXCR1	Q8N123	301 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	GPATCH3	Q96I76	525 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	CDX2	Q99626	313 aa	Predicted RBP	11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	TSEN34	Q9BSV6	310 aa	Known RBP	11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	SEMA6B	Q9H3T3	888 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985	FAM184B	Q9ULE4	1060 aa		11.4	□□□□□ -0.58
DDX42-215	ENST00000582985		M0R2C6	588 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	ZBED4	O75132	1171 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	PRDM1	O75626	825 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	ZFY	P08048	801 aa	Predicted RBP	11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	RAG1	P15918	1043 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	GNAT2	P19087	354 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	ACLY	P53396	1101 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	EPHB4	P54760	987 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	ANKRD33	Q7Z3H0	272 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	KLHDC9	Q8NEP7	349 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	NUP133	Q8WUM0	1156 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	MKL1	Q969V6	931 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	KIFC2	Q96AC6	838 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	CEP95	Q96GE4	821 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	RNPC3	Q96LT9	517 aa	Known RBP	11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	TTYH1	Q9H313	450 aa	Predicted RBP	11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	DCTPP1	Q9H773	170 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	SLC38A10	Q9HBR0	1119 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	ZNF287	Q9HBT7	754 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	RAVER2	Q9HCJ3	691 aa	Known RBP	11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	STARD7	Q9NQZ5	370 aa		11.39	□□□□□ -0.59
DDX42-215	ENST00000582985	TMEM39A	Q9NV64	488 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms