RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 IFT20Q8IY31 132 aa13.36□□□□□ -0.27
ERBB2-206ENST00000578373 BCAS4Q8TDM0 211 aa13.36□□□□□ -0.27
ERBB2-206ENST00000578373 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-206ENST00000578373 GSDMAQ96QA5 445 aa13.36□□□□□ -0.27
ERBB2-206ENST00000578373 FAM204AQ9H8W3 233 aa13.36□□□□□ -0.27
ERBB2-206ENST00000578373 LOC102724428A0A0B4J2F2 783 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 CRKLP46109 303 aaKnown RBP13.35□□□□□ -0.27
ERBB2-206ENST00000578373 SIK1P57059 783 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 GNGT1P63211 74 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 MSL1Q68DK7 614 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 NBPF10Q6P3W6 841 aaKnown RBP13.35□□□□□ -0.27
ERBB2-206ENST00000578373 NBPF15Q8N660 670 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 CNOT6LQ96LI5 555 aaKnown RBP13.35□□□□□ -0.27
ERBB2-206ENST00000578373 HAUS4Q9H6D7 363 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 POLD4Q9HCU8 107 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 CCDC169A6NNP5 214 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
ERBB2-206ENST00000578373 KRT71Q3SY84 523 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 CFAP221Q4G0U5 840 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 PEX26Q7Z412 305 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 MYCT1Q8N699 235 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 DPH5Q9H2P9 285 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 SYNCQ9H7C4 482 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 MRPL44Q9H9J2 332 aaKnown RBP13.35□□□□□ -0.27
ERBB2-206ENST00000578373 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 KRT5P13647 590 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 GUCY1A2P33402 732 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 WHAMMP3Q1A5X7 153 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 CTTNBP2NLQ9P2B4 639 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 MYO1AQ9UBC5 1043 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 RASAL2Q9UJF2 1139 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 PCDHA12Q9UN75 941 aa13.35□□□□□ -0.27
ERBB2-206ENST00000578373 USP17L3A6NCW0 530 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 USP17L4A6NCW7 530 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 TRIM49BA6NDI0 452 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 SRGAP2O75044 1071 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-206ENST00000578373 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 USP17L1Q7RTZ2 530 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 TPH2Q8IWU9 490 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 ENOX1Q8TC92 643 aaKnown RBP13.34□□□□□ -0.27
ERBB2-206ENST00000578373 FBF1Q8TES7 1133 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 RNF26Q9BY78 433 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-206ENST00000578373 CRB1P82279 1406 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 NEBLO76041 1014 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 CYP2D6P10635 497 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 VPS41P49754 854 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 CEP85LQ5SZL2 805 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 GPBP1Q86WP2 473 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 DHX40Q8IX18 779 aaKnown RBP13.34□□□□□ -0.27
ERBB2-206ENST00000578373 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
ERBB2-206ENST00000578373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
ERBB2-206ENST00000578373 FRMD4BQ9Y2L6 1034 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 HEG1Q9ULI3 1381 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 E7EVH7 732 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 ERCC5P28715 1186 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-206ENST00000578373 SLC7A5Q01650 507 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 CALCOCO2Q13137 446 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 PRR16Q569H4 304 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 SMIM5Q71RC9 77 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 PAGE5Q96GU1 130 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 PLVAPQ9BX97 442 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 EXOC3O60645 756 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 SLC16A2P36021 539 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 CCT5P48643 541 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 CYP2J2P51589 502 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 GUCY2DQ02846 1103 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 SHC4Q6S5L8 630 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 NEK8Q86SG6 692 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 GJA10Q969M2 543 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 DNM3Q9UQ16 869 aa13.34□□□□□ -0.27
ERBB2-206ENST00000578373 FAM205CA6NFA0 338 aa13.33□□□□□ -0.27
ERBB2-206ENST00000578373 BIRC3Q13489 604 aa13.33□□□□□ -0.27
ERBB2-206ENST00000578373 SUSD4Q5VX71 490 aa13.33□□□□□ -0.27
ERBB2-206ENST00000578373 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.27
ERBB2-206ENST00000578373 USP49Q70CQ1 688 aa13.33□□□□□ -0.27
ERBB2-206ENST00000578373 PNMA8AQ86V59 439 aaPredicted RBP13.33□□□□□ -0.27
ERBB2-206ENST00000578373 ABCB6Q9NP58 842 aa13.33□□□□□ -0.27
ERBB2-206ENST00000578373 E9PCH4 1651 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 BACH1O14867 736 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 IQCB1Q15051 598 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 SARM1Q6SZW1 724 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 MYOCDQ8IZQ8 938 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 MGARPQ8TDB4 240 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 COA7Q96BR5 231 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 CABS1Q96KC9 395 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 ARPP21Q9UBL0 812 aaPredicted RBP13.33□□□□□ -0.28
ERBB2-206ENST00000578373 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
ERBB2-206ENST00000578373 TUBB2AQ13885 445 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 TERF2Q15554 542 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms