RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
NPLOC4-207ENST00000572346 XPNPEP3Q9NQH7 507 aa17.64■□□□□ 0.41
NPLOC4-207ENST00000572346 PDLIM7Q9NR12 457 aa17.64■□□□□ 0.41
NPLOC4-207ENST00000572346 NYAP2Q9P242 653 aa17.64■□□□□ 0.41
NPLOC4-207ENST00000572346 ROBO3Q96MS0 1386 aa17.64■□□□□ 0.41
NPLOC4-207ENST00000572346 MYH4Q9Y623 1939 aa17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 MINDY4BA8MYZ0 360 aa17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 F5H6K3 240 aa17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 ZNF865P0CJ78 1059 aaPredicted RBP17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 KLRC3Q07444 240 aa17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 SH3RF1Q7Z6J0 888 aa17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 BADQ92934 168 aa17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 PHF24Q9UPV7 400 aa17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 SALL3Q9BXA9 1300 aa17.63■□□□□ 0.41
NPLOC4-207ENST00000572346 TRIM43BA6NCK2 446 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 RNF113AO15541 343 aaKnown RBP17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 NDUFB10O96000 172 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 PGK1P00558 417 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 PDE4AP27815 886 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 SHHQ15465 462 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 C9orf50Q5SZB4 431 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 SNRNP48Q6IEG0 339 aaKnown RBP17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 RNF180Q86T96 592 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 PI4K2BQ8TCG2 481 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 TRIM43Q96BQ3 446 aaPredicted RBP17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 GUCD1Q96NT3 240 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 TEX13BQ9BXU2 312 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 EPB41L4AQ9HCS5 686 aaPredicted RBP17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 RIPK3Q9Y572 518 aa17.62■□□□□ 0.41
NPLOC4-207ENST00000572346 IGKV6D-41A0A0C4DH26 115 aa17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 GPAA1O43292 621 aa17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 AKR1A1P14550 325 aa17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 TLE2Q04725 743 aa17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 PRPF38AQ8NAV1 312 aaKnown RBP17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 LENG1Q96BZ8 264 aaPredicted RBP17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 FAM161BQ96MY7 647 aa17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 CLIP2Q9UDT6 1046 aa17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 CNPY2Q9Y2B0 182 aa17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 LAMA2P24043 3122 aaKnown RBP17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 A0A0C4DFX4 3053 aa17.61■□□□□ 0.41
NPLOC4-207ENST00000572346 M0R2C6 588 aa17.6■□□□□ 0.41
NPLOC4-207ENST00000572346 ZFYP08048 801 aaPredicted RBP17.6■□□□□ 0.41
NPLOC4-207ENST00000572346 MSL3Q8N5Y2 521 aaKnown RBP17.6■□□□□ 0.41
NPLOC4-207ENST00000572346 OSBPL3Q9H4L5 887 aa17.6■□□□□ 0.41
NPLOC4-207ENST00000572346 DNAJC25-GNG10A0A024R161 153 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 A0A1W2PQ45 241 aaPredicted RBP17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 A0A1W2PQY0 241 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 TRIM6-TRIM34B2RNG4 842 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 ATP2A1O14983 1001 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 ADAMTS4O75173 837 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 PRDM1O75626 825 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 GNAT2P19087 354 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 ITGB8P26012 769 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 TDO2P48775 406 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 ZNF697Q5TEC3 545 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 ZNF444Q8N0Y2 327 aaPredicted RBP17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 CPXCR1Q8N123 301 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 MKL1Q969V6 931 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 DDX11Q96FC9 970 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 TACC3Q9Y6A5 838 aa17.59■□□□□ 0.41
NPLOC4-207ENST00000572346 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 SNAI1O95863 264 aaPredicted RBP17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 APPP05067 770 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 CLTBP09497 229 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 SLC4A3P48751 1232 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 LRRFIP1Q32MZ4 808 aaKnown RBP17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 MAMDC4Q6UXC1 1216 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 IFNL3Q8IZI9 196 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 CEP95Q96GE4 821 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 FSD1Q9BTV5 496 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 MTMR4Q9NYA4 1195 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 CUL9Q8IWT3 2517 aa17.58■□□□□ 0.4
NPLOC4-207ENST00000572346 MCM3APO60318 1980 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 SYNRGQ9UMZ2 1314 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 PATL2C9JE40 543 aaKnown RBP17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 ZBED4O75132 1171 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 RILPL2Q969X0 211 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 KIFC2Q96AC6 838 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 EVI5LQ96CN4 794 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 SEC62Q99442 399 aaKnown RBP17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 TSEN34Q9BSV6 310 aaKnown RBP17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 SLC38A10Q9HBR0 1119 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 RAVER2Q9HCJ3 691 aaKnown RBP17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 ZHX1Q9UKY1 873 aaPredicted RBP17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 FAM184BQ9ULE4 1060 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 SYNPO2Q9UMS6 1093 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 CTDP1Q9Y5B0 961 aaPredicted RBP17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
NPLOC4-207ENST00000572346 KIAA0355O15063 1070 aa17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 PQBP1O60828 265 aaKnown RBP17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 TTLL1O95922 423 aa17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 ACLYP53396 1101 aa17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 ZNF467Q7Z7K2 595 aaPredicted RBP17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 GMCL1P1Q8NEA9 526 aa17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 KLHDC9Q8NEP7 349 aa17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 FEM1BQ9UK73 627 aa17.56■□□□□ 0.4
NPLOC4-207ENST00000572346 PLIN4Q96Q06 1357 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms