RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 TMEM260Q9NX78 707 aa6.86□□□□□ -1.31
LINC00560-201ENST00000564593 FHOD1Q9Y613 1164 aa6.86□□□□□ -1.31
LINC00560-201ENST00000564593 PTCH2Q9Y6C5 1203 aa6.86□□□□□ -1.31
LINC00560-201ENST00000564593 FAM155AB1AL88 458 aaPredicted RBP6.85□□□□□ -1.31
LINC00560-201ENST00000564593 GSC2O15499 205 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 ADCY3O60266 1144 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 IGLV1-40P01703 118 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 FSTP19883 344 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 NMIQ13287 307 aaPredicted RBP6.85□□□□□ -1.31
LINC00560-201ENST00000564593 FZD5Q13467 585 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 HSP90AA2PQ14568 343 aaPredicted RBP6.85□□□□□ -1.31
LINC00560-201ENST00000564593 PPP2R5DQ14738 602 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 LONRF2Q1L5Z9 754 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 TMC3Q7Z5M5 1100 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 ZNF227Q86WZ6 799 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 ZSWIM2Q8NEG5 633 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 SHKBP1Q8TBC3 707 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 SYTL5Q8TDW5 730 aaPredicted RBP6.85□□□□□ -1.31
LINC00560-201ENST00000564593 METTL22Q9BUU2 404 aaPredicted RBP6.85□□□□□ -1.31
LINC00560-201ENST00000564593 DSCC1Q9BVC3 393 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 DIS3Q9Y2L1 958 aaKnown RBP6.85□□□□□ -1.31
LINC00560-201ENST00000564593 CAPN6Q9Y6Q1 641 aa6.85□□□□□ -1.31
LINC00560-201ENST00000564593 SIGLEC6O43699 453 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 TAL1P17542 331 aaPredicted RBP6.84□□□□□ -1.31
LINC00560-201ENST00000564593 PPP2R2AP63151 447 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 TNK2Q07912 1038 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 POMZP3Q6PJE2 187 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 ZNF662Q6ZS27 426 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 ARHGEF39Q8N4T4 335 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 CRACR2BQ8N4Y2 399 aaPredicted RBP6.84□□□□□ -1.31
LINC00560-201ENST00000564593 FIBCD1Q8N539 461 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 PIWIL2Q8TC59 973 aaKnown RBP6.84□□□□□ -1.31
LINC00560-201ENST00000564593 SLC26A8Q96RN1 970 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 LRRC4CQ9HCJ2 640 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 ARHGEF4Q9NR80 690 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 CGGBP1Q9UFW8 167 aaPredicted RBP6.84□□□□□ -1.31
LINC00560-201ENST00000564593 EMC9Q9Y3B6 208 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 SBNO2Q9Y2G9 1366 aa6.84□□□□□ -1.31
LINC00560-201ENST00000564593 TRAV20A0A0B4J274 112 aa6.83□□□□□ -1.32
LINC00560-201ENST00000564593 MEIS1O00470 390 aa6.83□□□□□ -1.32
LINC00560-201ENST00000564593 PRAMEF1O95521 474 aa6.83□□□□□ -1.32
LINC00560-201ENST00000564593 ITIH2P19823 946 aa6.83□□□□□ -1.32
LINC00560-201ENST00000564593 CLEC16AQ2KHT3 1053 aa6.83□□□□□ -1.32
LINC00560-201ENST00000564593 ZC3H12BQ5HYM0 836 aaKnown RBP6.83□□□□□ -1.32
LINC00560-201ENST00000564593 FAM181AQ8N9Y4 354 aa6.83□□□□□ -1.32
LINC00560-201ENST00000564593 CDC6Q99741 560 aa6.83□□□□□ -1.32
LINC00560-201ENST00000564593 AARSD1Q9BTE6 412 aaKnown RBP6.83□□□□□ -1.32
LINC00560-201ENST00000564593 CHST7Q9NS84 486 aa6.83□□□□□ -1.32
LINC00560-201ENST00000564593 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC00560-201ENST00000564593 SF3B6Q9Y3B4 125 aaKnown RBP6.83□□□□□ -1.32
LINC00560-201ENST00000564593 TBX1O43435 398 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 KCNH1O95259 989 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 OXCT1P55809 520 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 PLEKHG4Q58EX7 1191 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 TMEM67Q5HYA8 995 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 CDKAL1Q5VV42 579 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 C16orf86Q6ZW13 317 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 TRIM59Q8IWR1 403 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 MRGPRX3Q96LB0 322 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 ZDHHC15Q96MV8 337 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 IPO9Q96P70 1041 aaKnown RBP6.82□□□□□ -1.32
LINC00560-201ENST00000564593 KRTAP4-2Q9BYR5 136 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 MINPP1Q9UNW1 487 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 RNF114Q9Y508 228 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 SHISA3A0PJX4 238 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 ANKRD62A6NC57 917 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 YOD1Q5VVQ6 348 aaPredicted RBP6.82□□□□□ -1.32
LINC00560-201ENST00000564593 FOXB2Q5VYV0 432 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 ENOX1Q8TC92 643 aaKnown RBP6.82□□□□□ -1.32
LINC00560-201ENST00000564593 GPR62Q9BZJ7 368 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 MKNK2Q9HBH9 465 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 OAS3Q9Y6K5 1087 aaKnown RBP6.82□□□□□ -1.32
LINC00560-201ENST00000564593 U3KQE9 123 aa6.82□□□□□ -1.32
LINC00560-201ENST00000564593 ASMTLO95671 621 aa6.81□□□□□ -1.32
LINC00560-201ENST00000564593 L1CAMP32004 1257 aa6.81□□□□□ -1.32
LINC00560-201ENST00000564593 GRIA2P42262 883 aa6.81□□□□□ -1.32
LINC00560-201ENST00000564593 CPSF6Q16630 551 aaKnown RBP eCLIP6.81□□□□□ -1.32
LINC00560-201ENST00000564593 NKPD1Q17RQ9 610 aa6.81□□□□□ -1.32
LINC00560-201ENST00000564593 CWF19L1Q69YN2 538 aaKnown RBP6.81□□□□□ -1.32
LINC00560-201ENST00000564593 BTN2A2Q8WVV5 523 aa6.81□□□□□ -1.32
LINC00560-201ENST00000564593 DUSP15Q9H1R2 295 aaPredicted RBP6.81□□□□□ -1.32
LINC00560-201ENST00000564593 TRIT1Q9H3H1 467 aaKnown RBP6.81□□□□□ -1.32
LINC00560-201ENST00000564593 GPATCH2Q9NW75 528 aa6.81□□□□□ -1.32
LINC00560-201ENST00000564593 TRBV23-1A0A0A0MS06 115 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 CCDC163A0A0D9SF12 145 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 KIAA1324LA8MWY0 1029 aaPredicted RBP6.8□□□□□ -1.32
LINC00560-201ENST00000564593 CYP26A1O43174 497 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 PRODHO43272 600 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 VAMP4O75379 141 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 GRB10Q13322 594 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 TCEA2Q15560 299 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 FAM209AQ5JX71 171 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 GTF2IRD2BQ6EKJ0 949 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 GTF2IRD2Q86UP8 949 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 SCUBE1Q8IWY4 988 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 DAGLBQ8NCG7 672 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 DHRS4Q9BTZ2 278 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 HDAC8Q9BY41 377 aa6.8□□□□□ -1.32
LINC00560-201ENST00000564593 SLKQ9H2G2 1235 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms