RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 C9orf50Q5SZB4 431 aa24.95■■□□□ 1.58
HERC2-204ENST00000563945 CPXCR1Q8N123 301 aa24.95■■□□□ 1.58
HERC2-204ENST00000563945 REPS2Q8NFH8 660 aa24.95■■□□□ 1.58
HERC2-204ENST00000563945 GUCD1Q96NT3 240 aa24.95■■□□□ 1.58
HERC2-204ENST00000563945 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.95■■□□□ 1.58
HERC2-204ENST00000563945 COL11A1P12107 1806 aaPredicted RBP24.95■■□□□ 1.58
HERC2-204ENST00000563945 DNAH12Q6ZR08 3092 aa24.94■■□□□ 1.58
HERC2-204ENST00000563945 PQBP1O60828 265 aaKnown RBP24.94■■□□□ 1.58
HERC2-204ENST00000563945 NDUFB10O96000 172 aa24.94■■□□□ 1.58
HERC2-204ENST00000563945 ZNF865P0CJ78 1059 aaPredicted RBP24.94■■□□□ 1.58
HERC2-204ENST00000563945 NUP133Q8WUM0 1156 aa24.94■■□□□ 1.58
HERC2-204ENST00000563945 KIFC2Q96AC6 838 aa24.94■■□□□ 1.58
HERC2-204ENST00000563945 TSEN34Q9BSV6 310 aaKnown RBP24.94■■□□□ 1.58
HERC2-204ENST00000563945 TMEM39AQ9NV64 488 aa24.94■■□□□ 1.58
HERC2-204ENST00000563945 ZHX1Q9UKY1 873 aaPredicted RBP24.94■■□□□ 1.58
HERC2-204ENST00000563945 A0A1W2PQ45 241 aaPredicted RBP24.93■■□□□ 1.58
HERC2-204ENST00000563945 A0A1W2PQY0 241 aa24.93■■□□□ 1.58
HERC2-204ENST00000563945 DCDC2CA8MYV0 355 aa24.93■■□□□ 1.58
HERC2-204ENST00000563945 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.93■■□□□ 1.58
HERC2-204ENST00000563945 OSBP2Q969R2 916 aa24.93■■□□□ 1.58
HERC2-204ENST00000563945 STARD7Q9NQZ5 370 aa24.93■■□□□ 1.58
HERC2-204ENST00000563945 ISY1Q9ULR0 285 aaKnown RBP24.93■■□□□ 1.58
HERC2-204ENST00000563945 PARP14Q460N5 1801 aa24.93■■□□□ 1.58
HERC2-204ENST00000563945 SYNGAP1Q96PV0 1343 aa24.92■■□□□ 1.58
HERC2-204ENST00000563945 SMAD3P84022 425 aaKnown RBP24.92■■□□□ 1.58
HERC2-204ENST00000563945 ANKRD35Q8N283 1001 aa24.92■■□□□ 1.58
HERC2-204ENST00000563945 NACAP1Q9BZK3 213 aa24.92■■□□□ 1.58
HERC2-204ENST00000563945 SEMA6BQ9H3T3 888 aa24.92■■□□□ 1.58
HERC2-204ENST00000563945 SPC25Q9HBM1 224 aa24.92■■□□□ 1.58
HERC2-204ENST00000563945 FEM1BQ9UK73 627 aa24.92■■□□□ 1.58
HERC2-204ENST00000563945 GPAA1O43292 621 aa24.91■■□□□ 1.58
HERC2-204ENST00000563945 SLC3A2P08195 630 aaKnown RBP24.91■■□□□ 1.58
HERC2-204ENST00000563945 ACLYP53396 1101 aa24.91■■□□□ 1.58
HERC2-204ENST00000563945 C20orf194Q5TEA3 1177 aa24.91■■□□□ 1.58
HERC2-204ENST00000563945 VTI1AQ96AJ9 217 aa24.91■■□□□ 1.58
HERC2-204ENST00000563945 RNPC3Q96LT9 517 aaKnown RBP24.91■■□□□ 1.58
HERC2-204ENST00000563945 CDX2Q99626 313 aaPredicted RBP24.91■■□□□ 1.58
HERC2-204ENST00000563945 FBXO40Q9UH90 709 aa24.91■■□□□ 1.58
HERC2-204ENST00000563945 LTBP2Q14767 1821 aa24.91■■□□□ 1.58
HERC2-204ENST00000563945 PLXNA1Q9UIW2 1896 aa24.9■■□□□ 1.58
HERC2-204ENST00000563945 MOXD2PA6NHM9 499 aa24.9■■□□□ 1.58
HERC2-204ENST00000563945 PATL2C9JE40 543 aaKnown RBP24.9■■□□□ 1.58
HERC2-204ENST00000563945 PRDM1O75626 825 aa24.9■■□□□ 1.58
HERC2-204ENST00000563945 DCTPP1Q9H773 170 aa24.9■■□□□ 1.58
HERC2-204ENST00000563945 RAVER2Q9HCJ3 691 aaKnown RBP24.9■■□□□ 1.58
HERC2-204ENST00000563945 RIPK3Q9Y572 518 aa24.9■■□□□ 1.58
HERC2-204ENST00000563945 ROBO3Q96MS0 1386 aa24.9■■□□□ 1.58
HERC2-204ENST00000563945 A0A0C4DFX4 3053 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 ATP2A1O14983 1001 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 KIAA0355O15063 1070 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 ADAMTS4O75173 837 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 TTLL1O95922 423 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 FPGSQ05932 587 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 KCNA10Q16322 511 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 MAMDC4Q6UXC1 1216 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 CHST13Q8NET6 341 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 MKL1Q969V6 931 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 LENG1Q96BZ8 264 aaPredicted RBP24.89■■□□□ 1.58
HERC2-204ENST00000563945 GLT1D1Q96MS3 346 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 TOX2Q96NM4 488 aa24.89■■□□□ 1.58
HERC2-204ENST00000563945 DUSP11O75319 330 aaKnown RBP24.88■■□□□ 1.57
HERC2-204ENST00000563945 SNAI1O95863 264 aaPredicted RBP24.88■■□□□ 1.57
HERC2-204ENST00000563945 TSPY3P0CV98 308 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 TSPY8P0CW00 308 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 PDE4BQ07343 736 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 ACVR2BQ13705 512 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 TSHZ3Q63HK5 1081 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 ZNF467Q7Z7K2 595 aaPredicted RBP24.88■■□□□ 1.57
HERC2-204ENST00000563945 IFNL3Q8IZI9 196 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 PCSK9Q8NBP7 692 aaKnown RBP24.88■■□□□ 1.57
HERC2-204ENST00000563945 CEP95Q96GE4 821 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 ABHD16BQ9H3Z7 469 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 MTMR4Q9NYA4 1195 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 SYNPO2Q9UMS6 1093 aa24.88■■□□□ 1.57
HERC2-204ENST00000563945 SYNRGQ9UMZ2 1314 aa24.87■■□□□ 1.57
HERC2-204ENST00000563945 DNAJC25-GNG10A0A024R161 153 aa24.87■■□□□ 1.57
HERC2-204ENST00000563945 ERC2O15083 957 aa24.87■■□□□ 1.57
HERC2-204ENST00000563945 FDX1P10109 184 aa24.87■■□□□ 1.57
HERC2-204ENST00000563945 BMP3P12645 472 aa24.87■■□□□ 1.57
HERC2-204ENST00000563945 IKQ13123 557 aaPredicted RBP24.87■■□□□ 1.57
HERC2-204ENST00000563945 SLFN13Q68D06 897 aa24.87■■□□□ 1.57
HERC2-204ENST00000563945 SLC38A10Q9HBR0 1119 aa24.87■■□□□ 1.57
HERC2-204ENST00000563945 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.87■■□□□ 1.57
HERC2-204ENST00000563945 IGKV6D-41A0A0C4DH26 115 aa24.86■■□□□ 1.57
HERC2-204ENST00000563945 C6orf222P0C671 652 aaPredicted RBP24.86■■□□□ 1.57
HERC2-204ENST00000563945 OAZ1P54368 228 aa24.86■■□□□ 1.57
HERC2-204ENST00000563945 ANKRD33Q7Z3H0 272 aa24.86■■□□□ 1.57
HERC2-204ENST00000563945 LRRC47Q8N1G4 583 aaKnown RBP24.86■■□□□ 1.57
HERC2-204ENST00000563945 KLHDC9Q8NEP7 349 aa24.86■■□□□ 1.57
HERC2-204ENST00000563945 MAFAQ8NHW3 353 aaPredicted RBP24.86■■□□□ 1.57
HERC2-204ENST00000563945 EPB41L4AQ9HCS5 686 aaPredicted RBP24.86■■□□□ 1.57
HERC2-204ENST00000563945 MROH7Q68CQ1 1323 aa24.86■■□□□ 1.57
HERC2-204ENST00000563945 M0R2C6 588 aa24.85■■□□□ 1.57
HERC2-204ENST00000563945 ITGB8P26012 769 aa24.85■■□□□ 1.57
HERC2-204ENST00000563945 PPP4R3BQ5MIZ7 849 aa24.85■■□□□ 1.57
HERC2-204ENST00000563945 GMCL1P1Q8NEA9 526 aa24.85■■□□□ 1.57
HERC2-204ENST00000563945 CHURC1Q8WUH1 139 aa24.85■■□□□ 1.57
HERC2-204ENST00000563945 NAPBQ9H115 298 aa24.85■■□□□ 1.57
HERC2-204ENST00000563945 ELP1O95163 1332 aa24.85■■□□□ 1.57
HERC2-204ENST00000563945 FAAP100Q0VG06 881 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 382.2 ms