RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TROAPQ12815 778 aa13.98□□□□□ -0.17
RABGGTA-218ENST00000560777 IKQ13123 557 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-218ENST00000560777 MOV10L1Q9BXT6 1211 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-218ENST00000560777 SPATC1LQ9H0A9 340 aa13.98□□□□□ -0.17
RABGGTA-218ENST00000560777 SLC38A10Q9HBR0 1119 aa13.98□□□□□ -0.17
RABGGTA-218ENST00000560777 ZNF214Q9UL59 606 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-218ENST00000560777 PRR12Q9ULL5 1215 aa13.98□□□□□ -0.17
RABGGTA-218ENST00000560777 ZBED4O75132 1171 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 PSMA5P28066 241 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 CCNA1P78396 465 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 PLS1Q14651 629 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 BLOC1S2Q6QNY1 142 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 CATIPQ7Z7H3 387 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 UBA5Q9GZZ9 404 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 PTPN22Q9Y2R2 807 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 ZSWIM8A7E2V4 1837 aa13.97□□□□□ -0.17
RABGGTA-218ENST00000560777 PALM3A6NDB9 673 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 TNPO2O14787 897 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 ATP2A1O14983 1001 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 PARP1P09874 1014 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 FDX1P10109 184 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 CASTP20810 708 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 RPS6KB1P23443 525 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 HOXD10P28358 340 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 MAPK4P31152 587 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 STAT3P40763 770 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 SNAP25P60880 206 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 SYDE2Q5VT97 1194 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 NFXL1Q6ZNB6 911 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 SGMS1Q86VZ5 419 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 TM6SF1Q9BZW5 370 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 MCOLN1Q9GZU1 580 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 CPVLQ9H3G5 476 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 RAVER2Q9HCJ3 691 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 SRRDQ9UH36 339 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 MAD2L2Q9UI95 211 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 GJD2Q9UKL4 321 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 GABRQQ9UN88 632 aa13.96□□□□□ -0.17
RABGGTA-218ENST00000560777 A0A0G2JMZ2 1700 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 ZNF536O15090 1300 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 CCDC69A6NI79 296 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 ERCC3P19447 782 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 ANAPC15P60006 121 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 GRM4Q14833 912 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 RUFY3Q7L099 469 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 RIOX2Q8IUF8 465 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 ZNF654Q8IZM8 581 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 CPXCR1Q8N123 301 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 COA7Q96BR5 231 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 IL17RAQ96F46 866 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 MAP3K14Q99558 947 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 MYL10Q9BUA6 226 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 BRPF3Q9ULD4 1205 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 RIPK3Q9Y572 518 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 MGAMO43451 1857 aa13.95□□□□□ -0.18
RABGGTA-218ENST00000560777 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 KLRF2D3W0D1 207 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 SLC25A27O95847 323 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 FLT3LGP49771 235 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 OAZ1P54368 228 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 PRMT2P55345 433 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 PRKCZQ05513 592 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 SNRNP48Q6IEG0 339 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 FBXO46Q6PJ61 603 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 Q6ZUG5 572 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 PLEKHH3Q7Z736 793 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 NCAPG2Q86XI2 1143 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 NUP133Q8WUM0 1156 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 AGBL1Q96MI9 1066 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 TEX13BQ9BXU2 312 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 RANBP17Q9H2T7 1088 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 MROH8Q9H579 483 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 CTDP1Q9Y5B0 961 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 SLC12A7Q9Y666 1083 aa13.94□□□□□ -0.18
RABGGTA-218ENST00000560777 DDAH1O94760 285 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 PTPREP23469 700 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 SLC4A3P48751 1232 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 SLC35G1Q2M3R5 365 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 MORN1Q5T089 497 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 WDR78Q5VTH9 848 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 NBPF11Q86T75 865 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 USP6NLQ92738 828 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 AGXT2Q9BYV1 514 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 UPF3BQ9BZI7 483 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 VAT1LQ9HCJ6 419 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 CYP46A1Q9Y6A2 500 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 PTCH2Q9Y6C5 1203 aa13.93□□□□□ -0.18
RABGGTA-218ENST00000560777 SLC15A5A6NIM6 579 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms