RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 RLFQ13129 1914 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 MSCO60682 206 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 PDE4AP27815 886 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 SLC1A4P43007 532 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 AKNAD1Q5T1N1 836 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 MFSD6Q6ZSS7 791 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 FAM160B2Q86V87 743 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 NBPF3Q9H094 633 aa20.81■□□□□ 0.92
SMAD3-210ENST00000559092 DIS3Q9Y2L1 958 aaKnown RBP20.81■□□□□ 0.92
SMAD3-210ENST00000559092 ZNF213O14771 459 aa20.8■□□□□ 0.92
SMAD3-210ENST00000559092 CYP2C19P33261 490 aa20.8■□□□□ 0.92
SMAD3-210ENST00000559092 STAT2P52630 851 aa20.8■□□□□ 0.92
SMAD3-210ENST00000559092 STAG1Q8WVM7 1258 aa20.8■□□□□ 0.92
SMAD3-210ENST00000559092 TOMM22Q9NS69 142 aa20.8■□□□□ 0.92
SMAD3-210ENST00000559092 NR2E3Q9Y5X4 410 aa20.8■□□□□ 0.92
SMAD3-210ENST00000559092 A0A0G2JMZ2 1700 aa20.8■□□□□ 0.92
SMAD3-210ENST00000559092 TMEM232C9JQI7 657 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 NMT2O60551 498 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 MCCP23508 829 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 MNX1P50219 401 aaPredicted RBP20.79■□□□□ 0.92
SMAD3-210ENST00000559092 TTC22Q5TAA0 569 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 SNRNP48Q6IEG0 339 aaKnown RBP20.79■□□□□ 0.92
SMAD3-210ENST00000559092 RCSD1Q6JBY9 416 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 MAML3Q96JK9 1138 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 TTC14Q96N46 770 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 DSCC1Q9BVC3 393 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 DDX20Q9UHI6 824 aaKnown RBP20.79■□□□□ 0.92
SMAD3-210ENST00000559092 CTNNA3Q9UI47 895 aa20.79■□□□□ 0.92
SMAD3-210ENST00000559092 H0YGN5 161 aa20.78■□□□□ 0.92
SMAD3-210ENST00000559092 HAND2P61296 217 aa20.78■□□□□ 0.92
SMAD3-210ENST00000559092 RRP12Q5JTH9 1297 aaKnown RBP20.78■□□□□ 0.92
SMAD3-210ENST00000559092 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMAD3-210ENST00000559092 FBXO40Q9UH90 709 aa20.78■□□□□ 0.92
SMAD3-210ENST00000559092 NRBP1Q9UHY1 535 aa20.78■□□□□ 0.92
SMAD3-210ENST00000559092 TOP1P11387 765 aaKnown RBP20.77■□□□□ 0.92
SMAD3-210ENST00000559092 CYBAP13498 195 aa20.77■□□□□ 0.92
SMAD3-210ENST00000559092 ZNF792Q3KQV3 632 aa20.77■□□□□ 0.92
SMAD3-210ENST00000559092 CPXCR1Q8N123 301 aa20.77■□□□□ 0.92
SMAD3-210ENST00000559092 TRPV1Q8NER1 839 aa20.77■□□□□ 0.92
SMAD3-210ENST00000559092 DIS3LQ8TF46 1054 aaKnown RBP20.77■□□□□ 0.92
SMAD3-210ENST00000559092 DCAF4Q8WV16 495 aa20.77■□□□□ 0.92
SMAD3-210ENST00000559092 RIPK3Q9Y572 518 aa20.77■□□□□ 0.92
SMAD3-210ENST00000559092 EVI5O60447 810 aa20.76■□□□□ 0.91
SMAD3-210ENST00000559092 PGK2P07205 417 aa20.76■□□□□ 0.91
SMAD3-210ENST00000559092 GSPT1P15170 499 aaKnown RBP20.76■□□□□ 0.91
SMAD3-210ENST00000559092 CNGA1P29973 690 aa20.76■□□□□ 0.91
SMAD3-210ENST00000559092 TBC1D10CQ8IV04 446 aa20.76■□□□□ 0.91
SMAD3-210ENST00000559092 MSL3Q8N5Y2 521 aaKnown RBP20.76■□□□□ 0.91
SMAD3-210ENST00000559092 CHST13Q8NET6 341 aa20.76■□□□□ 0.91
SMAD3-210ENST00000559092 ESR2Q92731 530 aa20.76■□□□□ 0.91
SMAD3-210ENST00000559092 TMEM47Q9BQJ4 181 aa20.76■□□□□ 0.91
SMAD3-210ENST00000559092 C11orf49Q9H6J7 331 aa20.76■□□□□ 0.91
SMAD3-210ENST00000559092 RAVER2Q9HCJ3 691 aaKnown RBP20.76■□□□□ 0.91
SMAD3-210ENST00000559092 SEPT4O43236 478 aa20.75■□□□□ 0.91
SMAD3-210ENST00000559092 IKQ13123 557 aaPredicted RBP20.75■□□□□ 0.91
SMAD3-210ENST00000559092 RUFY2Q8WXA3 655 aa20.75■□□□□ 0.91
SMAD3-210ENST00000559092 DDX11Q96FC9 970 aa20.75■□□□□ 0.91
SMAD3-210ENST00000559092 TINF2Q9BSI4 451 aa20.75■□□□□ 0.91
SMAD3-210ENST00000559092 ISY1Q9ULR0 285 aaKnown RBP20.75■□□□□ 0.91
SMAD3-210ENST00000559092 ZNF236Q9UL36 1845 aa20.75■□□□□ 0.91
SMAD3-210ENST00000559092 DNAJC25-GNG10A0A024R161 153 aa20.74■□□□□ 0.91
SMAD3-210ENST00000559092 COL6A1P12109 1028 aa20.74■□□□□ 0.91
SMAD3-210ENST00000559092 IMMTQ16891 758 aaKnown RBP20.74■□□□□ 0.91
SMAD3-210ENST00000559092 CCDC178Q5BJE1 867 aa20.74■□□□□ 0.91
SMAD3-210ENST00000559092 KCTD1Q719H9 257 aa20.74■□□□□ 0.91
SMAD3-210ENST00000559092 RAD50Q92878 1312 aa20.74■□□□□ 0.91
SMAD3-210ENST00000559092 TKFCQ3LXA3 575 aa20.73■□□□□ 0.91
SMAD3-210ENST00000559092 BTNL9Q6UXG8 535 aa20.73■□□□□ 0.91
SMAD3-210ENST00000559092 ZNF467Q7Z7K2 595 aaPredicted RBP20.73■□□□□ 0.91
SMAD3-210ENST00000559092 DGKHQ86XP1 1220 aa20.73■□□□□ 0.91
SMAD3-210ENST00000559092 ARRDC4Q8NCT1 418 aa20.73■□□□□ 0.91
SMAD3-210ENST00000559092 SLC4A3P48751 1232 aa20.72■□□□□ 0.91
SMAD3-210ENST00000559092 ANKRD35Q8N283 1001 aa20.72■□□□□ 0.91
SMAD3-210ENST00000559092 PRR12Q9ULL5 1215 aa20.72■□□□□ 0.91
SMAD3-210ENST00000559092 DNM1LO00429 736 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 CHMLP26374 656 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 CCDC96Q2M329 555 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 PRAMEF19Q5SWL8 479 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 MAMDC4Q6UXC1 1216 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 IQCA1Q86XH1 822 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 ANKS1AQ92625 1134 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 ZNF536O15090 1300 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 SYNGAP1Q96PV0 1343 aa20.71■□□□□ 0.91
SMAD3-210ENST00000559092 PARP14Q460N5 1801 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 HABP4Q5JVS0 413 aaKnown RBP20.7■□□□□ 0.9
SMAD3-210ENST00000559092 CHMP4CQ96CF2 233 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 AGBL1Q96MI9 1066 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 KRT23Q9C075 422 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 ACAD9Q9H845 621 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 CNNM2Q9H8M5 875 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 CNPY2Q9Y2B0 182 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 PFASO15067 1338 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 NEDD4P46934 1319 aa20.7■□□□□ 0.9
SMAD3-210ENST00000559092 CEP290O15078 2479 aa20.69■□□□□ 0.9
SMAD3-210ENST00000559092 KDM4AO75164 1064 aa20.69■□□□□ 0.9
SMAD3-210ENST00000559092 SNHG28P0DPA3 235 aa20.69■□□□□ 0.9
SMAD3-210ENST00000559092 PDHBP11177 359 aa20.69■□□□□ 0.9
SMAD3-210ENST00000559092 PNMA2Q9UL42 364 aa20.69■□□□□ 0.9
SMAD3-210ENST00000559092 COLQQ9Y215 455 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms