RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PRPF38AQ8NAV1 312 aaKnown RBP20.19■□□□□ 0.82
LRRC28-210ENST00000558879 TEX13BQ9BXU2 312 aa20.19■□□□□ 0.82
LRRC28-210ENST00000558879 PRO3102Q9H379 93 aa20.19■□□□□ 0.82
LRRC28-210ENST00000558879 C11orf49Q9H6J7 331 aa20.19■□□□□ 0.82
LRRC28-210ENST00000558879 IL17RBQ9NRM6 502 aa20.19■□□□□ 0.82
LRRC28-210ENST00000558879 SLC5A4Q9NY91 659 aa20.19■□□□□ 0.82
LRRC28-210ENST00000558879 DDX20Q9UHI6 824 aaKnown RBP20.19■□□□□ 0.82
LRRC28-210ENST00000558879 TSPY2A6NKD2 308 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 FGAP02671 866 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 SDSP20132 328 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 RILPL2Q969X0 211 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 GMCL1Q96IK5 515 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 MMP19Q99542 508 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 SLC38A10Q9HBR0 1119 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 INCENPQ9NQS7 918 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 FEM1BQ9UK73 627 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 NR2E3Q9Y5X4 410 aa20.18■□□□□ 0.82
LRRC28-210ENST00000558879 EVI5O60447 810 aa20.17■□□□□ 0.82
LRRC28-210ENST00000558879 SLFN13Q68D06 897 aa20.17■□□□□ 0.82
LRRC28-210ENST00000558879 SNRNP48Q6IEG0 339 aaKnown RBP20.17■□□□□ 0.82
LRRC28-210ENST00000558879 DIS3Q9Y2L1 958 aaKnown RBP20.17■□□□□ 0.82
LRRC28-210ENST00000558879 BMP3P12645 472 aa20.16■□□□□ 0.82
LRRC28-210ENST00000558879 KCTD2Q14681 263 aa20.16■□□□□ 0.82
LRRC28-210ENST00000558879 ZNF792Q3KQV3 632 aa20.16■□□□□ 0.82
LRRC28-210ENST00000558879 RIPK3Q9Y572 518 aa20.16■□□□□ 0.82
LRRC28-210ENST00000558879 RANBP2P49792 3224 aaKnown RBP20.16■□□□□ 0.82
LRRC28-210ENST00000558879 NMT2O60551 498 aa20.15■□□□□ 0.82
LRRC28-210ENST00000558879 STAT2P52630 851 aa20.15■□□□□ 0.82
LRRC28-210ENST00000558879 OAZ1P54368 228 aa20.15■□□□□ 0.82
LRRC28-210ENST00000558879 CHRDL2Q6WN34 429 aa20.15■□□□□ 0.82
LRRC28-210ENST00000558879 KIFC2Q96AC6 838 aa20.15■□□□□ 0.82
LRRC28-210ENST00000558879 STX8Q9UNK0 236 aa20.15■□□□□ 0.82
LRRC28-210ENST00000558879 DNAH12Q6ZR08 3092 aa20.14■□□□□ 0.82
LRRC28-210ENST00000558879 DNAJC25-GNG10A0A024R161 153 aa20.14■□□□□ 0.81
LRRC28-210ENST00000558879 SEPT4O43236 478 aa20.14■□□□□ 0.81
LRRC28-210ENST00000558879 PLA2G6O60733 806 aa20.14■□□□□ 0.81
LRRC28-210ENST00000558879 PGK2P07205 417 aa20.14■□□□□ 0.81
LRRC28-210ENST00000558879 FDX1P10109 184 aa20.14■□□□□ 0.81
LRRC28-210ENST00000558879 MFAP1P55081 439 aaKnown RBP20.14■□□□□ 0.81
LRRC28-210ENST00000558879 RASGRP2Q7LDG7 609 aa20.14■□□□□ 0.81
LRRC28-210ENST00000558879 NRBP1Q9UHY1 535 aa20.14■□□□□ 0.81
LRRC28-210ENST00000558879 RANBP6O60518 1105 aaKnown RBP20.13■□□□□ 0.81
LRRC28-210ENST00000558879 PCP11498 1178 aaKnown RBP20.13■□□□□ 0.81
LRRC28-210ENST00000558879 PDE4AP27815 886 aa20.13■□□□□ 0.81
LRRC28-210ENST00000558879 CNGA1P29973 690 aa20.13■□□□□ 0.81
LRRC28-210ENST00000558879 FXR1P51114 621 aaKnown RBP eCLIP20.13■□□□□ 0.81
LRRC28-210ENST00000558879 FAM160B2Q86V87 743 aa20.13■□□□□ 0.81
LRRC28-210ENST00000558879 TBC1D10CQ8IV04 446 aa20.13■□□□□ 0.81
LRRC28-210ENST00000558879 STAG1Q8WVM7 1258 aa20.13■□□□□ 0.81
LRRC28-210ENST00000558879 TCP11L1Q9NUJ3 509 aa20.13■□□□□ 0.81
LRRC28-210ENST00000558879 ZNF536O15090 1300 aa20.12■□□□□ 0.81
LRRC28-210ENST00000558879 TMEM232C9JQI7 657 aa20.12■□□□□ 0.81
LRRC28-210ENST00000558879 DNM1LO00429 736 aa20.12■□□□□ 0.81
LRRC28-210ENST00000558879 ZBED4O75132 1171 aa20.12■□□□□ 0.81
LRRC28-210ENST00000558879 SLC1A4P43007 532 aa20.12■□□□□ 0.81
LRRC28-210ENST00000558879 C7orf61Q8IZ16 206 aa20.12■□□□□ 0.81
LRRC28-210ENST00000558879 CPXCR1Q8N123 301 aa20.12■□□□□ 0.81
LRRC28-210ENST00000558879 TINF2Q9BSI4 451 aa20.12■□□□□ 0.81
LRRC28-210ENST00000558879 RAVER2Q9HCJ3 691 aaKnown RBP20.12■□□□□ 0.81
LRRC28-210ENST00000558879 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
LRRC28-210ENST00000558879 HIP1O00291 1037 aa20.11■□□□□ 0.81
LRRC28-210ENST00000558879 MCCP23508 829 aa20.11■□□□□ 0.81
LRRC28-210ENST00000558879 HAND2P61296 217 aa20.11■□□□□ 0.81
LRRC28-210ENST00000558879 PRAMEF19Q5SWL8 479 aa20.11■□□□□ 0.81
LRRC28-210ENST00000558879 AKNAD1Q5T1N1 836 aa20.11■□□□□ 0.81
LRRC28-210ENST00000558879 MSL3Q8N5Y2 521 aaKnown RBP20.11■□□□□ 0.81
LRRC28-210ENST00000558879 DIAPH3Q9NSV4 1193 aa20.11■□□□□ 0.81
LRRC28-210ENST00000558879 NEDD4P46934 1319 aa20.1■□□□□ 0.81
LRRC28-210ENST00000558879 SYNGAP1Q96PV0 1343 aa20.1■□□□□ 0.81
LRRC28-210ENST00000558879 GSPT1P15170 499 aaKnown RBP20.1■□□□□ 0.81
LRRC28-210ENST00000558879 LRRC26Q2I0M4 334 aa20.1■□□□□ 0.81
LRRC28-210ENST00000558879 RCSD1Q6JBY9 416 aa20.1■□□□□ 0.81
LRRC28-210ENST00000558879 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
LRRC28-210ENST00000558879 CHST13Q8NET6 341 aa20.1■□□□□ 0.81
LRRC28-210ENST00000558879 CHURC1Q8WUH1 139 aa20.1■□□□□ 0.81
LRRC28-210ENST00000558879 FGD4Q96M96 766 aa20.1■□□□□ 0.81
LRRC28-210ENST00000558879 FBXO40Q9UH90 709 aa20.1■□□□□ 0.81
LRRC28-210ENST00000558879 RRP12Q5JTH9 1297 aaKnown RBP20.09■□□□□ 0.81
LRRC28-210ENST00000558879 TTC22Q5TAA0 569 aa20.09■□□□□ 0.81
LRRC28-210ENST00000558879 MAMDC4Q6UXC1 1216 aa20.09■□□□□ 0.81
LRRC28-210ENST00000558879 KCTD1Q719H9 257 aa20.09■□□□□ 0.81
LRRC28-210ENST00000558879 ZNF467Q7Z7K2 595 aaPredicted RBP20.09■□□□□ 0.81
LRRC28-210ENST00000558879 DCAF4Q8WV16 495 aa20.09■□□□□ 0.81
LRRC28-210ENST00000558879 TMEM47Q9BQJ4 181 aa20.09■□□□□ 0.81
LRRC28-210ENST00000558879 DSCC1Q9BVC3 393 aa20.09■□□□□ 0.81
LRRC28-210ENST00000558879 IL25Q9H293 177 aa20.09■□□□□ 0.81
LRRC28-210ENST00000558879 TOMM22Q9NS69 142 aa20.09■□□□□ 0.81
LRRC28-210ENST00000558879 CTDP1Q9Y5B0 961 aaPredicted RBP20.09■□□□□ 0.81
LRRC28-210ENST00000558879 A0A1W2PPC1 479 aa20.08■□□□□ 0.81
LRRC28-210ENST00000558879 ZNF865P0CJ78 1059 aaPredicted RBP20.08■□□□□ 0.81
LRRC28-210ENST00000558879 TOP1P11387 765 aaKnown RBP20.08■□□□□ 0.81
LRRC28-210ENST00000558879 NT5C2P49902 561 aa20.08■□□□□ 0.81
LRRC28-210ENST00000558879 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.81
LRRC28-210ENST00000558879 ANO1Q5XXA6 986 aa20.08■□□□□ 0.81
LRRC28-210ENST00000558879 GDF15Q99988 308 aa20.08■□□□□ 0.81
LRRC28-210ENST00000558879 RNF41Q9H4P4 317 aaPredicted RBP20.08■□□□□ 0.81
LRRC28-210ENST00000558879 PRR12Q9ULL5 1215 aa20.08■□□□□ 0.81
LRRC28-210ENST00000558879 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
LRRC28-210ENST00000558879 BTNL9Q6UXG8 535 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms