RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TBC1D10CQ8IV04 446 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 PRPF38AQ8NAV1 312 aaKnown RBP14.82□□□□□ -0.04
SMAD3-208ENST00000558827 HTATIP2Q9BUP3 242 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 NBPF3Q9H094 633 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 ANAPC4Q9UJX5 808 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 A0A0G2JMZ2 1700 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 SLC25A27O95847 323 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 HOXC6P09630 235 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 GSPT1P15170 499 aaKnown RBP14.81□□□□□ -0.04
SMAD3-208ENST00000558827 SLC1A4P43007 532 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 SKAP1Q86WV1 359 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 ZKSCAN3Q9BRR0 538 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 IL25Q9H293 177 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 HOMER2Q9NSB8 354 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 FEM1BQ9UK73 627 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 OGDHLQ9ULD0 1010 aa14.81□□□□□ -0.04
SMAD3-208ENST00000558827 ORC4O43929 436 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 EVI5O60447 810 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 KCTD2Q14681 263 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 TTC22Q5TAA0 569 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 TTBK2Q6IQ55 1244 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 CCDC174Q6PII3 467 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 GMCL1P1Q8NEA9 526 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 MAML3Q96JK9 1138 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 GPCPD1Q9NPB8 672 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 COLQQ9Y215 455 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-208ENST00000558827 FRMPD2Q68DX3 1309 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-208ENST00000558827 PLIN4Q96Q06 1357 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 TRIOBPQ9H2D6 2365 aa14.8□□□□□ -0.04
SMAD3-208ENST00000558827 SMCHD1A6NHR9 2005 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 SLC16A2P36021 539 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 AKNAD1Q5T1N1 836 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 MFSD6Q6ZSS7 791 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 C7orf61Q8IZ16 206 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 DDX11Q96FC9 970 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 AGBL1Q96MI9 1066 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 TMEM47Q9BQJ4 181 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 TEX13BQ9BXU2 312 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 C11orf49Q9H6J7 331 aa14.79□□□□□ -0.04
SMAD3-208ENST00000558827 DDX20Q9UHI6 824 aaKnown RBP14.79□□□□□ -0.04
SMAD3-208ENST00000558827 ZMYND8Q9ULU4 1186 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-208ENST00000558827 NEDD4P46934 1319 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 ZNF213O14771 459 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 FGRP09769 529 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 CYBAP13498 195 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 MFAP1P55081 439 aaKnown RBP14.78□□□□□ -0.04
SMAD3-208ENST00000558827 GJC2Q5T442 439 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-208ENST00000558827 RCSD1Q6JBY9 416 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 SLC38A10Q9HBR0 1119 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 SLC5A4Q9NY91 659 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 ALPK3Q96L96 1907 aa14.78□□□□□ -0.04
SMAD3-208ENST00000558827 SYN1P17600 705 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 STAT2P52630 851 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 ATN1P54259 1190 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-208ENST00000558827 ZNF792Q3KQV3 632 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 HABP4Q5JVS0 413 aaKnown RBP14.77□□□□□ -0.05
SMAD3-208ENST00000558827 OLFML2BQ68BL8 750 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 ABRAQ8N0Z2 381 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 ANKLE1Q8NAG6 615 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 CHURC1Q8WUH1 139 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 PRR12Q9ULL5 1215 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 NR2E3Q9Y5X4 410 aa14.77□□□□□ -0.05
SMAD3-208ENST00000558827 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.05
SMAD3-208ENST00000558827 PFASO15067 1338 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 B4E1Z4 1266 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 HIP1O00291 1037 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 KDM4AO75164 1064 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 IGHA2P01877 340 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 TOP1P11387 765 aaKnown RBP14.76□□□□□ -0.05
SMAD3-208ENST00000558827 ALAS1P13196 640 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 ANKRD35Q8N283 1001 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 LENG1Q96BZ8 264 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-208ENST00000558827 GMCL1Q96IK5 515 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 SENP6Q9GZR1 1112 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-208ENST00000558827 PLXNA1Q9UIW2 1896 aa14.76□□□□□ -0.05
SMAD3-208ENST00000558827 GOLGA8HP0CJ92 632 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 CNTN2Q02246 1040 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 PTH1RQ03431 593 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 FAM160B2Q86V87 743 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 TICAM2Q86XR7 235 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 FERMT2Q96AC1 680 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 TINF2Q9BSI4 451 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 CPVLQ9H3G5 476 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 RNF146Q9NTX7 359 aa14.75□□□□□ -0.05
SMAD3-208ENST00000558827 ZNF536O15090 1300 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 ZNF236Q9UL36 1845 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 CHMLP26374 656 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 COPB2P35606 906 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 LRRC26Q2I0M4 334 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 MUM1L1Q5H9M0 696 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 PPP4R3BQ5MIZ7 849 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 DCAF4Q8WV16 495 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 ESR2Q92731 530 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 TRERF1Q96PN7 1200 aa14.74□□□□□ -0.05
SMAD3-208ENST00000558827 PURBQ96QR8 312 aaKnown RBP14.74□□□□□ -0.05
SMAD3-208ENST00000558827 RNF41Q9H4P4 317 aaPredicted RBP14.74□□□□□ -0.05
SMAD3-208ENST00000558827 RBM27Q9P2N5 1060 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms