RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 MYLIPQ8WY64 445 aa8.1□□□□□ -1.11
GPHN-215ENST00000557654 HAUS7Q99871 368 aa8.1□□□□□ -1.11
GPHN-215ENST00000557654 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.1□□□□□ -1.112e-7■□□□□ 8.2
GPHN-215ENST00000557654 PHAXQ9H814 394 aaKnown RBP8.1□□□□□ -1.11
GPHN-215ENST00000557654 ZMYM5Q9UJ78 669 aa8.1□□□□□ -1.11
GPHN-215ENST00000557654 SLC12A7Q9Y666 1083 aa8.1□□□□□ -1.11
GPHN-215ENST00000557654 SMAD7O15105 426 aaKnown RBP8.09□□□□□ -1.11
GPHN-215ENST00000557654 USP2O75604 605 aaPredicted RBP8.09□□□□□ -1.11
GPHN-215ENST00000557654 EFEMP2O95967 443 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 GLI1P08151 1106 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 FGRP09769 529 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 ETFBP38117 255 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 CASP7P55210 303 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 SLC7A5Q01650 507 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.11
GPHN-215ENST00000557654 ANKRD39Q53RE8 183 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 TMEM67Q5HYA8 995 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 LINC01599Q8WXQ3 324 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 DHX38Q92620 1227 aaKnown RBP8.09□□□□□ -1.11
GPHN-215ENST00000557654 SYTL4Q96C24 671 aaPredicted RBP8.09□□□□□ -1.11
GPHN-215ENST00000557654 FGD4Q96M96 766 aa8.09□□□□□ -1.11
GPHN-215ENST00000557654 EPHX1P07099 455 aa8.08□□□□□ -1.12
GPHN-215ENST00000557654 VHLLQ6RSH7 139 aa8.08□□□□□ -1.12
GPHN-215ENST00000557654 MCF2L2Q86YR7 1114 aa8.08□□□□□ -1.12
GPHN-215ENST00000557654 FIBCD1Q8N539 461 aa8.08□□□□□ -1.12
GPHN-215ENST00000557654 RNF32Q9H0A6 362 aa8.08□□□□□ -1.12
GPHN-215ENST00000557654 KLHL25Q9H0H3 589 aa8.08□□□□□ -1.12
GPHN-215ENST00000557654 NOL6Q9H6R4 1146 aaKnown RBP8.08□□□□□ -1.12
GPHN-215ENST00000557654 AP5S1Q9NUS5 200 aa8.08□□□□□ -1.12
GPHN-215ENST00000557654 PSPNO60542 156 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 ZNF205O95201 554 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 VAV1P15498 845 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 BMP8BP34820 402 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 ARID5AQ03989 594 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 DUSP4Q13115 394 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 PPP2R5DQ14738 602 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 MLANAQ16655 118 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 KIAA1211LQ6NV74 962 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 MAP6Q96JE9 813 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 ZDHHC15Q96MV8 337 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 CDADC1Q9BWV3 514 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 PRR13Q9NZ81 148 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 FHOD1Q9Y613 1164 aa8.07□□□□□ -1.12
GPHN-215ENST00000557654 NOTOA8MTQ0 251 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 GSNP06396 782 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 ITGA4P13612 1032 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 TCEAL1Q15170 157 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 RTP2Q5QGT7 225 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 HEATR6Q6AI08 1181 aaKnown RBP8.06□□□□□ -1.12
GPHN-215ENST00000557654 MPZL3Q6UWV2 235 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 PRR23BQ6ZRT6 265 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 OXR1Q8N573 874 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 HHIPL1Q96JK4 782 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 KRTAP9-2Q9BYQ4 174 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 ZNF408Q9H9D4 720 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 KCNK12Q9HB15 430 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 SUSD2Q9UGT4 822 aa8.06□□□□□ -1.12
GPHN-215ENST00000557654 FITM1A5D6W6 292 aa8.05□□□□□ -1.12
GPHN-215ENST00000557654 LRRC10BA6NIK2 292 aa8.05□□□□□ -1.12
GPHN-215ENST00000557654 B2RBV5 119 aa8.05□□□□□ -1.12
GPHN-215ENST00000557654 CEBPAP49715 358 aaPredicted RBP8.05□□□□□ -1.12
GPHN-215ENST00000557654 ZNF648Q5T619 568 aaPredicted RBP8.05□□□□□ -1.12
GPHN-215ENST00000557654 LARP1BQ659C4 914 aaKnown RBP8.05□□□□□ -1.12
GPHN-215ENST00000557654 ADAT2Q7Z6V5 191 aaKnown RBP8.05□□□□□ -1.12
GPHN-215ENST00000557654 ANKS4BQ8N8V4 417 aa8.05□□□□□ -1.12
GPHN-215ENST00000557654 SLC12A9Q9BXP2 914 aa8.05□□□□□ -1.12
GPHN-215ENST00000557654 ERVK13-1Q9NX77 482 aa8.05□□□□□ -1.12
GPHN-215ENST00000557654 GPR160Q9UJ42 338 aa8.05□□□□□ -1.12
GPHN-215ENST00000557654 GSTM1P09488 218 aa8.04□□□□□ -1.12
GPHN-215ENST00000557654 KIR3DS1Q14943 382 aa8.04□□□□□ -1.12
GPHN-215ENST00000557654 CWF19L1Q69YN2 538 aaKnown RBP8.04□□□□□ -1.12
GPHN-215ENST00000557654 CEP128Q6ZU80 1094 aa8.04□□□□□ -1.12
GPHN-215ENST00000557654 SIRT2Q8IXJ6 389 aa8.04□□□□□ -1.12
GPHN-215ENST00000557654 DIRC2Q96SL1 478 aa8.04□□□□□ -1.12
GPHN-215ENST00000557654 ACTR10Q9NZ32 417 aa8.04□□□□□ -1.12
GPHN-215ENST00000557654 WHRNQ9P202 907 aa8.04□□□□□ -1.12
GPHN-215ENST00000557654 APEX2Q9UBZ4 518 aa8.04□□□□□ -1.12
GPHN-215ENST00000557654 GPR55Q9Y2T6 319 aaPredicted RBP8.04□□□□□ -1.12
GPHN-215ENST00000557654 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.03□□□□□ -1.12
GPHN-215ENST00000557654 CD3EP07766 207 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 IFNGR1P15260 489 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 TXKP42681 527 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 CHRNEQ04844 493 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 NR0B2Q15466 257 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 C6orf15Q6UXA7 325 aaPredicted RBP8.03□□□□□ -1.12
GPHN-215ENST00000557654 SPPL2CQ8IUH8 684 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 TMEM52Q8NDY8 209 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 MICAL1Q8TDZ2 1067 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 SHISA4Q96DD7 197 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 FCRL2Q96LA5 508 aaPredicted RBP8.03□□□□□ -1.12
GPHN-215ENST00000557654 PLCD4Q9BRC7 762 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 MCMBPQ9BTE3 642 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 LGR4Q9BXB1 951 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
GPHN-215ENST00000557654 FADS2P1A8MWK0 482 aa8.02□□□□□ -1.13
GPHN-215ENST00000557654 VAMP4O75379 141 aa8.02□□□□□ -1.13
GPHN-215ENST00000557654 LILRA2Q8N149 483 aa8.02□□□□□ -1.13
GPHN-215ENST00000557654 SLC43A3Q8NBI5 491 aa8.02□□□□□ -1.13
GPHN-215ENST00000557654 FCRL3Q96P31 734 aaPredicted RBP8.02□□□□□ -1.13
GPHN-215ENST00000557654 GBP3Q9H0R5 595 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms