RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 MTIF2P46199 727 aaKnown RBP19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 LIG3P49916 1009 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 ATP1A2P50993 1020 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 TBC1D8BQ0IIM8 1120 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 SND1Q7KZF4 910 aaKnown RBP eCLIP19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 CRACR2AQ9BSW2 395 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 LRWD1Q9UFC0 647 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 SIPA1L3O60292 1781 aaPredicted RBP19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 ABCC12Q96J65 1359 aa19.14■□□□□ 0.66
PPP4R3A-208ENST00000555462 BUB1O43683 1085 aa19.14■□□□□ 0.66
PPP4R3A-208ENST00000555462 DYMQ7RTS9 669 aa19.14■□□□□ 0.66
PPP4R3A-208ENST00000555462 EIF3CLB5ME19 914 aaKnown RBP19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 USP17L8P0C7I0 530 aa19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 CYP19A1P11511 503 aaPredicted RBP19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 CCT5P48643 541 aa19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 NPY5RQ15761 445 aa19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 OR8K1Q8NGG5 319 aa19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 EIF3CQ99613 913 aaKnown RBP19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 CENPHQ9H3R5 247 aa19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 RNF41Q9H4P4 317 aaPredicted RBP19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 STK36Q9NRP7 1315 aa19.14■□□□□ 0.65
PPP4R3A-208ENST00000555462 USP17L3A6NCW0 530 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 USP17L4A6NCW7 530 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 FGFR2P21802 821 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 UBA7P41226 1012 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 APBA1Q02410 837 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 TROAPQ12815 778 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 WDR59Q6PJI9 974 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 USP17L1Q7RTZ2 530 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 CSGALNACT2Q8N6G5 542 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 LRRC15Q8TF66 581 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 COG1Q8WTW3 980 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 ATP8B1O43520 1251 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 PRDX5P30044 214 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 PIP4K2BP78356 416 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 MICALL1Q8N3F8 863 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 ZNF579Q8NAF0 562 aaKnown RBP19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 RNF26Q9BY78 433 aaPredicted RBP19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 SLC39A2Q9NP94 309 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 MOCS3O95396 460 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 PACS2Q86VP3 889 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 GPR101Q96P66 508 aaPredicted RBP19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 MMRN2Q9H8L6 949 aa19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 MAGEC2Q9UBF1 373 aaPredicted RBP19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 DMGDHQ9UI17 866 aaKnown RBP19.13■□□□□ 0.65
PPP4R3A-208ENST00000555462 MYH2Q9UKX2 1941 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 ZSCAN5CA6NGD5 496 aaPredicted RBP19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 SYF2O95926 243 aaKnown RBP19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 STIM1Q13586 685 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 SH3RF1Q7Z6J0 888 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 SH2D3CQ8N5H7 860 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 SLIT3O75094 1523 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 LRRC41Q15345 812 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 LETM2Q2VYF4 491 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 PDXDC2PQ6P474 469 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 NFRKBQ6P4R8 1299 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 MB21D1Q8N884 522 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 MS4A14Q96JA4 679 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 MCM9Q9NXL9 1143 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 SAP30BPQ9UHR5 308 aaKnown RBP19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 FER1L4A9Z1Z3 1794 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 ZEB2O60315 1214 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 IPO7O95373 1038 aaKnown RBP19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 FUT2Q10981 343 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 TRIM28Q13263 835 aaKnown RBP19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 MSANTD4Q8NCY6 345 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 AFAP1L1Q8TED9 768 aa19.12■□□□□ 0.65
PPP4R3A-208ENST00000555462 MYH10P35580 1976 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 EPHB6O15197 1021 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 C2CD5Q86YS7 1000 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 ZNF384Q8TF68 577 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 RAB21Q9UL25 225 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 C4BP0C0L5 1744 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 ASIC1P78348 528 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 ALX1Q15699 326 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 TUBGCP2Q9BSJ2 902 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 LRRC1Q9BTT6 524 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 NAA15Q9BXJ9 866 aaKnown RBP19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 TANGO6Q9C0B7 1094 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 DEF6Q9H4E7 631 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 NHEJ1Q9H9Q4 299 aaPredicted RBP19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 TBC1D7Q9P0N9 293 aa19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 PACSIN2Q9UNF0 486 aaPredicted RBP19.11■□□□□ 0.65
PPP4R3A-208ENST00000555462 AKAP11Q9UKA4 1901 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 CCDC194A0A1B0GVG4 234 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 AMPD2Q01433 879 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 STK4Q13043 487 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 BRINP3Q76B58 766 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 TMTC2Q8N394 836 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 NLRC4Q9NPP4 1024 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 CAPN6Q9Y6Q1 641 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 SCG2P13521 617 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 ATP2C1P98194 919 aaPredicted RBP19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 PDE4DQ08499 809 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 IFT81Q8WYA0 676 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 SELENOOQ9BVL4 669 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 PLA2G12BQ9BX93 195 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 ATP6V1AP38606 617 aa19.1■□□□□ 0.65
PPP4R3A-208ENST00000555462 WHAMMP3Q1A5X7 153 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms