RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3A-201ENST00000554308 DNAI1Q9UI46 699 aa16.67■□□□□ 0.26
PPP4R3A-201ENST00000554308 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
PPP4R3A-201ENST00000554308 SNED1Q8TER0 1413 aa16.67■□□□□ 0.26
PPP4R3A-201ENST00000554308 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 MPHOSPH10O00566 681 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 NLRP12P59046 1061 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 ZNF174Q15697 407 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 HEATR3Q7Z4Q2 680 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 TRIM75PA6NK02 468 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 CUTAO60888 179 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 ATP2B2Q01814 1243 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 LRRC47Q8N1G4 583 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 BPIFA3Q9BQP9 254 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 KCNH3Q9ULD8 1083 aa16.66■□□□□ 0.26
PPP4R3A-201ENST00000554308 PSDA5PKW4 1024 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 NT5C2P49902 561 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 GNAQP50148 359 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 GABPAQ06546 454 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 RESP18Q5W5W9 173 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 TYW1BQ6NUM6 668 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 PDILTQ8N807 584 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 RASGRP4Q8TDF6 673 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 ZDHHC15Q96MV8 337 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 EPC1Q9H2F5 836 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 MYH6P13533 1939 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 USP17L5A8MUK1 530 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 LONRF3Q496Y0 759 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 MTMR4Q9NYA4 1195 aa16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-201ENST00000554308 TMEM232C9JQI7 657 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 TOP1P11387 765 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 CEP131Q9UPN4 1083 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 HPSEQ9Y251 543 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 CDK5RAP2Q96SN8 1893 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 YDJCA8MPS7 323 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 RAD21O60216 631 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 HLA-DOAP06340 250 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 DPEP1P16444 411 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 PTPREP23469 700 aa16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 TDRD3Q9H7E2 651 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 FRMPD2Q68DX3 1309 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3A-201ENST00000554308 DDX60LQ5H9U9 1706 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 RAD17O75943 681 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 PLA2G4AP47712 749 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 HSP90AA4PQ58FG1 418 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 WWC2Q6AWC2 1192 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 TRIM65Q6PJ69 517 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 CSRNP2Q9H175 543 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 TMX1Q9H3N1 280 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 ZNF277Q9NRM2 450 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 MYH1P12882 1939 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 DDTLA6NHG4 134 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 SEC31AO94979 1220 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 SHMT1P34896 483 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 ETF1P62495 437 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 PNOCQ13519 176 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 PPP1R1BQ9UD71 204 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-201ENST00000554308 MCM7P33993 719 aa16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 BMS1Q14692 1282 aaKnown RBP16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 BLIDQ8IZY5 108 aa16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 SRPRBQ9Y5M8 271 aaKnown RBP16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 ADAMTSL1Q8N6G6 1762 aa16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 SCN9AQ15858 1988 aa16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 PTGDRQ13258 359 aa16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 TTC38Q5R3I4 469 aa16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
PPP4R3A-201ENST00000554308 FOXN1O15353 648 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 URI1O94763 535 aaPredicted RBP16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 EPSTI1Q96J88 318 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 PRMT6Q96LA8 375 aaPredicted RBP16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 CARD6Q9BX69 1037 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 PDHBP11177 359 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 KCNA3P22001 575 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 CALML3P27482 149 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 UBASH3AP57075 661 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 TAF3Q5VWG9 929 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 CC2D2BQ6DHV5 1058 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 LARGE2Q8N3Y3 721 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 SUPT20HQ8NEM7 779 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 PIGSQ96S52 555 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
PPP4R3A-201ENST00000554308 VWA3AA6NCI4 1184 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 TTLL1O95922 423 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms