RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DNAJC25-GNG10A0A024R161 153 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 PLA2G6O60733 806 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 TSPY3P0CV98 308 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 TSPY8P0CW00 308 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 PPARAQ07869 468 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 SNX17Q15036 470 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 C1orf53Q5VUE5 145 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 ZNF467Q7Z7K2 595 aaPredicted RBP7.86□□□□□ -1.15
SLIRP-203ENST00000554074 TDHQ8IZJ6 230 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 GMCL1Q96IK5 515 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 CRBNQ96SW2 442 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 SEC62Q99442 399 aaKnown RBP7.86□□□□□ -1.15
SLIRP-203ENST00000554074 TINF2Q9BSI4 451 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 SENP6Q9GZR1 1112 aaPredicted RBP7.86□□□□□ -1.15
SLIRP-203ENST00000554074 SLC38A10Q9HBR0 1119 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 HELLSQ9NRZ9 838 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 CLIP2Q9UDT6 1046 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 ANAPC4Q9UJX5 808 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 FEM1BQ9UK73 627 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.86□□□□□ -1.15
SLIRP-203ENST00000554074 LAMA3Q16787 3333 aa7.86□□□□□ -1.15
SLIRP-203ENST00000554074 ZMYM6O95789 1325 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 SYNGAP1Q96PV0 1343 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 KBTBD13C9JR72 458 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 FOXP2O15409 715 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 RAD21O60216 631 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 ZBED4O75132 1171 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 PRDM1O75626 825 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 FGRP09769 529 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 SYN1P17600 705 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 NOVP48745 357 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 PDE1AP54750 535 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 ALX1Q15699 326 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 ANKRD45Q5TZF3 282 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 SNRNP48Q6IEG0 339 aaKnown RBP7.85□□□□□ -1.15
SLIRP-203ENST00000554074 MAMDC4Q6UXC1 1216 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 SLC39A5Q6ZMH5 540 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 FAM160B2Q86V87 743 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 STK11IPQ8N1F8 1099 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 CHST13Q8NET6 341 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 NUP88Q99567 741 aaPredicted RBP7.85□□□□□ -1.15
SLIRP-203ENST00000554074 UBE2OQ9C0C9 1292 aaKnown RBP7.85□□□□□ -1.15
SLIRP-203ENST00000554074 FBXO40Q9UH90 709 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 RIPK3Q9Y572 518 aa7.85□□□□□ -1.15
SLIRP-203ENST00000554074 LAMA2P24043 3122 aaKnown RBP7.84□□□□□ -1.15
SLIRP-203ENST00000554074 SOX1O00570 391 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-203ENST00000554074 ORC4O43929 436 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 PGK2P07205 417 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 ZNF865P0CJ78 1059 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-203ENST00000554074 RARBP10826 455 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 BMP3P12645 472 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 AKR1A1P14550 325 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 RTP1P59025 263 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 TFAP4Q01664 338 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 LRRC41Q15345 812 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 FAM47AQ5JRC9 791 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 PRAMEF19Q5SWL8 479 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 GJC2Q5T442 439 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-203ENST00000554074 SLFN13Q68D06 897 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 SAMD1Q6SPF0 538 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-203ENST00000554074 SMC5Q8IY18 1101 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 CHURC1Q8WUH1 139 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 DDX11Q96FC9 970 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 TSEN34Q9BSV6 310 aaKnown RBP7.84□□□□□ -1.15
SLIRP-203ENST00000554074 PHF24Q9UPV7 400 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 CNPY2Q9Y2B0 182 aa7.84□□□□□ -1.15
SLIRP-203ENST00000554074 CTDP1Q9Y5B0 961 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-203ENST00000554074 TSPY2A6NKD2 308 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 SNAI1O95863 264 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-203ENST00000554074 PCP11498 1178 aaKnown RBP7.83□□□□□ -1.16
SLIRP-203ENST00000554074 SLC1A4P43007 532 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 NT5C2P49902 561 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 STAT2P52630 851 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 ATN1P54259 1190 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-203ENST00000554074 TKFCQ3LXA3 575 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 MCMDC2Q4G0Z9 681 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 ANO1Q5XXA6 986 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 RNF180Q86T96 592 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 CPXCR1Q8N123 301 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 LRRC47Q8N1G4 583 aaKnown RBP7.83□□□□□ -1.16
SLIRP-203ENST00000554074 STAG1Q8WVM7 1258 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 KIFC2Q96AC6 838 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 LBHD1Q9BQE6 289 aaPredicted RBP7.83□□□□□ -1.16
SLIRP-203ENST00000554074 XPNPEP3Q9NQH7 507 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 IL17RBQ9NRM6 502 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 PRKAG2Q9UGJ0 569 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 KIAA1217Q5T5P2 1943 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 COL6A3P12111 3177 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 MYO9BQ13459 2157 aa7.83□□□□□ -1.16
SLIRP-203ENST00000554074 TMEM232C9JQI7 657 aa7.82□□□□□ -1.16
SLIRP-203ENST00000554074 ADAMTS4O75173 837 aa7.82□□□□□ -1.16
SLIRP-203ENST00000554074 DUSP11O75319 330 aaKnown RBP7.82□□□□□ -1.16
SLIRP-203ENST00000554074 FGAP02671 866 aa7.82□□□□□ -1.16
SLIRP-203ENST00000554074 CENPBP07199 599 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-203ENST00000554074 TAL1P17542 331 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-203ENST00000554074 CST5P28325 142 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-203ENST00000554074 ADCYAP1R1P41586 468 aa7.82□□□□□ -1.16
SLIRP-203ENST00000554074 NKX3-2P78367 333 aa7.82□□□□□ -1.16
SLIRP-203ENST00000554074 MDM2Q00987 491 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-203ENST00000554074 CTDSPL2Q05D32 466 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms