RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 NUCB1Q02818 461 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 MCM6Q14566 821 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 PDXDC2PQ6P474 469 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 BPHLQ86WA6 291 aaPredicted RBP12.78□□□□□ -0.36
CNIH1-203ENST00000553660 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 OTUD7AQ8TE49 926 aaPredicted RBP12.78□□□□□ -0.36
CNIH1-203ENST00000553660 SDR42E1Q8WUS8 393 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 FOXJ1Q92949 421 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 MRGPRX2Q96LB1 330 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 STRBPQ96SI9 672 aaKnown RBP12.78□□□□□ -0.36
CNIH1-203ENST00000553660 PUS7LQ9H0K6 701 aaKnown RBP12.78□□□□□ -0.36
CNIH1-203ENST00000553660 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 MCM9Q9NXL9 1143 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 AGTPBP1Q9UPW5 1226 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 ADGRA2Q96PE1 1338 aa12.78□□□□□ -0.36
CNIH1-203ENST00000553660 TRIM75PA6NK02 468 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 IGHDP01880 384 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 SHMT1P34896 483 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 SPP2Q13103 211 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 PABPC4Q13310 644 aaKnown RBP eCLIP12.77□□□□□ -0.371e-12■■■■□ 24.3
CNIH1-203ENST00000553660 AGERQ15109 404 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 SBK1Q52WX2 424 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 C12orf60Q5U649 245 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 TSHZ3Q63HK5 1081 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 FBXO46Q6PJ61 603 aaPredicted RBP12.77□□□□□ -0.37
CNIH1-203ENST00000553660 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 AMOTL1Q8IY63 956 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 OSBP2Q969R2 916 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 EVI5LQ96CN4 794 aa12.77□□□□□ -0.37
CNIH1-203ENST00000553660 PHIPQ8WWQ0 1821 aa12.76□□□□□ -0.37
CNIH1-203ENST00000553660 VARSP26640 1264 aaKnown RBP12.76□□□□□ -0.37
CNIH1-203ENST00000553660 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
CNIH1-203ENST00000553660 LAPTM4AQ15012 233 aa12.76□□□□□ -0.37
CNIH1-203ENST00000553660 CERKLQ49MI3 558 aaPredicted RBP12.76□□□□□ -0.37
CNIH1-203ENST00000553660 SH3RF1Q7Z6J0 888 aa12.76□□□□□ -0.37
CNIH1-203ENST00000553660 C12orf42Q96LP6 360 aa12.76□□□□□ -0.37
CNIH1-203ENST00000553660 CCDC17Q96LX7 622 aa12.76□□□□□ -0.37
CNIH1-203ENST00000553660 ARPP21Q9UBL0 812 aaPredicted RBP12.76□□□□□ -0.37
CNIH1-203ENST00000553660 SLC4A4Q9Y6R1 1079 aa12.76□□□□□ -0.37
CNIH1-203ENST00000553660 USP17L10C9JJH3 530 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 USP17L21D6R901 530 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 GPAA1O43292 621 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 PRKAB2O43741 272 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 CHGBP05060 677 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 BCRP11274 1271 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 MYH1P12882 1939 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 MYH7P12883 1935 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 PRMT2P55345 433 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 JAG1P78504 1218 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 LACTBP83111 547 aaPredicted RBP12.75□□□□□ -0.37
CNIH1-203ENST00000553660 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 SLFNL1Q499Z3 407 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 FSD1Q9BTV5 496 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 KIAA1683Q9H0B3 1180 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 EFCC1Q9HA90 598 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
CNIH1-203ENST00000553660 ROBO3Q96MS0 1386 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 GSG1L2A8MUP6 293 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 NRG2O14511 850 aaPredicted RBP12.74□□□□□ -0.37
CNIH1-203ENST00000553660 GH2P01242 217 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 GCLCP48506 637 aaPredicted RBP12.74□□□□□ -0.37
CNIH1-203ENST00000553660 USP14P54578 494 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 KIF22Q14807 665 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 C4orf48Q5BLP8 95 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 TMEM179Q6ZVK1 233 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 CYP4X1Q8N118 509 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 TMOD4Q9NZQ9 345 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
CNIH1-203ENST00000553660 PTPRFP10586 1907 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
CNIH1-203ENST00000553660 SIAH2O43255 324 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 GDF11O95390 407 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 HMGCS2P54868 508 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 PTK2Q05397 1052 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 CTR9Q6PD62 1173 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
CNIH1-203ENST00000553660 PLEKHM2Q8IWE5 1019 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 CD99L2Q8TCZ2 262 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 GTF3C2Q8WUA4 911 aaPredicted RBP12.73□□□□□ -0.37
CNIH1-203ENST00000553660 NACAP1Q9BZK3 213 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 ZNF287Q9HBT7 754 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 PRM3Q9NNZ6 103 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 HELLSQ9NRZ9 838 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 TOR4AQ9NXH8 423 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.73□□□□□ -0.37
CNIH1-203ENST00000553660 PTPN22Q9Y2R2 807 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 GPSM3Q9Y4H4 160 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 NAV1Q8NEY1 1877 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 LOC285556D6RIA3 1793 aa12.73□□□□□ -0.37
CNIH1-203ENST00000553660 CYP2C8P10632 490 aa12.72□□□□□ -0.37
CNIH1-203ENST00000553660 GUCY1A2P33402 732 aa12.72□□□□□ -0.37
CNIH1-203ENST00000553660 CDK8P49336 464 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms