RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 H0Y8X5 98 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 KCNH1O95259 989 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 GDF11O95390 407 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 H2AFB1P0C5Y9 115 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 H2AFB2P0C5Z0 115 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 CTSKP43235 329 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 TCEA2Q15560 299 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 NKPD1Q17RQ9 610 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 GTF2IRD2BQ6EKJ0 949 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 POMZP3Q6PJE2 187 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 GTF2IRD2Q86UP8 949 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 SYNPOQ8N3V7 929 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 CRACR2BQ8N4Y2 399 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-210ENST00000553455 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 SHKBP1Q8TBC3 707 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 ZDHHC15Q96MV8 337 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 DHRS4Q9BTZ2 278 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 GPR62Q9BZJ7 368 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 DUSP15Q9H1R2 295 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-210ENST00000553455 CWC22Q9HCG8 908 aaKnown RBP7.53□□□□□ -1.2
SYNE2-210ENST00000553455 MRPS23Q9Y3D9 190 aaKnown RBP7.53□□□□□ -1.2
SYNE2-210ENST00000553455 ST14Q9Y5Y6 855 aa7.53□□□□□ -1.2
SYNE2-210ENST00000553455 TRBV23-1A0A0A0MS06 115 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 GNAT3A8MTJ3 354 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 WDR64B1ANS9 1081 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 PRODHO43272 600 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 PROCP04070 461 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 PABPC1P11940 636 aaKnown RBP7.52□□□□□ -1.21
SYNE2-210ENST00000553455 FSTP19883 344 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 GYS2P54840 703 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 CYP4F3Q08477 520 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 DOC2BQ14184 412 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 CBX2Q14781 532 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-210ENST00000553455 SF1Q15637 639 aaKnown RBP7.52□□□□□ -1.21
SYNE2-210ENST00000553455 DUSP27Q5VZP5 1158 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 SPACA3Q8IXA5 215 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 CDC6Q99741 560 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 IER2Q9BTL4 223 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 DSCC1Q9BVC3 393 aa7.52□□□□□ -1.21
SYNE2-210ENST00000553455 NCOA5Q9HCD5 579 aaKnown RBP7.52□□□□□ -1.21
SYNE2-210ENST00000553455 CCDC163A0A0D9SF12 145 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 MEIS1O00470 390 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 NCLP19338 710 aaKnown RBP7.51□□□□□ -1.21
SYNE2-210ENST00000553455 DALRD3Q5D0E6 543 aaKnown RBP7.51□□□□□ -1.21
SYNE2-210ENST00000553455 NKAPLQ5M9Q1 402 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 CRTC3Q6UUV7 619 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 SCUBE1Q8IWY4 988 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 TMEM151AQ8N4L1 468 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 DAGLBQ8NCG7 672 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 ENOX1Q8TC92 643 aaKnown RBP7.51□□□□□ -1.21
SYNE2-210ENST00000553455 GPATCH3Q96I76 525 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 MCMBPQ9BTE3 642 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 METTL22Q9BUU2 404 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-210ENST00000553455 NKX2-4Q9H2Z4 354 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 MKNK2Q9HBH9 465 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 PLAGL2Q9UPG8 496 aa7.51□□□□□ -1.21
SYNE2-210ENST00000553455 SF3B6Q9Y3B4 125 aaKnown RBP7.51□□□□□ -1.21
SYNE2-210ENST00000553455 DLX3O60479 287 aa7.5□□□□□ -1.21
SYNE2-210ENST00000553455 VAMP4O75379 141 aa7.5□□□□□ -1.21
SYNE2-210ENST00000553455 CEACAM5P06731 702 aa7.5□□□□□ -1.21
SYNE2-210ENST00000553455 ITIH2P19823 946 aa7.5□□□□□ -1.21
SYNE2-210ENST00000553455 GFRA1P56159 465 aa7.5□□□□□ -1.21
SYNE2-210ENST00000553455 RSPO4Q2I0M5 234 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-210ENST00000553455 NSMFQ6X4W1 530 aa7.5□□□□□ -1.21
SYNE2-210ENST00000553455 C1orf159Q96HA4 380 aa7.5□□□□□ -1.21
SYNE2-210ENST00000553455 OSBPL1AQ9BXW6 950 aa7.5□□□□□ -1.21
SYNE2-210ENST00000553455 ASCC2Q9H1I8 757 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-210ENST00000553455 GPR55Q9Y2T6 319 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-210ENST00000553455 WASH4PA8MWX3 477 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 FAM155AB1AL88 458 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-210ENST00000553455 GSC2O15499 205 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 SCG5P05408 212 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 GSNP06396 782 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 C6orf222P0C671 652 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-210ENST00000553455 SUMO1P63165 101 aaKnown RBP7.49□□□□□ -1.21
SYNE2-210ENST00000553455 AMPD2Q01433 879 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 CPSF6Q16630 551 aaKnown RBP eCLIP7.49□□□□□ -1.21
SYNE2-210ENST00000553455 C21orf62-AS1Q17RA5 79 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 ZDHHC13Q8IUH4 622 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 ZNF655Q8N720 491 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-210ENST00000553455 TCTN2Q96GX1 697 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 SLKQ9H2G2 1235 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-210ENST00000553455 ATG3Q9NT62 314 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 PRKAB1Q9Y478 270 aa7.49□□□□□ -1.21
SYNE2-210ENST00000553455 PLD2O14939 933 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 RAPGEF3O95398 923 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 MAP4K2Q12851 820 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 PABPC4Q13310 644 aaKnown RBP eCLIP7.48□□□□□ -1.21
SYNE2-210ENST00000553455 NTRK3Q16288 839 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 CLEC16AQ2KHT3 1053 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 PRSS53Q2L4Q9 553 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 DPY19L1Q2PZI1 675 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 GAB4Q2WGN9 574 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 RNF187Q5TA31 235 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-210ENST00000553455 CDKAL1Q5VV42 579 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 TSPYL5Q86VY4 417 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-210ENST00000553455 TMEM145Q8NBT3 493 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 HSPA12BQ96MM6 686 aa7.48□□□□□ -1.21
SYNE2-210ENST00000553455 CLUHP3Q96NS8 147 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms