RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TRPM4Q8TD43 1214 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 ZMYND12Q9H0C1 365 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 DEFB129Q9H1M3 183 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 PHF20L1A8MW92 1017 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 MTMR8Q96EF0 704 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 GMCL1Q96IK5 515 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 NDUFB10O96000 172 aa22.44■■□□□ 1.18
RBFOX1-215ENST00000553186 SLC16A2P36021 539 aa22.44■■□□□ 1.18
RBFOX1-215ENST00000553186 SNW1Q13573 536 aaKnown RBP22.44■■□□□ 1.18
RBFOX1-215ENST00000553186 ENGASEQ8NFI3 743 aa22.44■■□□□ 1.18
RBFOX1-215ENST00000553186 DDX19AQ9NUU7 478 aaKnown RBP22.44■■□□□ 1.18
RBFOX1-215ENST00000553186 EPS15P42566 896 aa22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 WNT7AO00755 349 aa22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 RAD21O60216 631 aa22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 LETM1O95202 739 aaPredicted RBP22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 ECE1P42892 770 aa22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 JMYQ8N9B5 988 aa22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 FSIP1Q8NA03 581 aa22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 ACER1Q8TDN7 264 aa22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 CCDC12Q8WUD4 166 aaPredicted RBP22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 MRPS27Q92552 414 aaKnown RBP22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 RNF181Q9P0P0 153 aa22.43■■□□□ 1.18
RBFOX1-215ENST00000553186 hCG_1984214I3L0E3 225 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 NAPAP54920 295 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 PIK3AP1Q6ZUJ8 805 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 ZNF713Q8N859 430 aaPredicted RBP22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 TMX2Q9Y320 296 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 PNMA6FA0A0J9YX94 578 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 USP17L10C9JJH3 530 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 ATP2B1P20020 1258 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 HIRAP54198 1017 aaPredicted RBP22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 ANGEL2Q5VTE6 544 aaKnown RBP22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 NUP62CLQ9H1M0 184 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 ARHGEF10LQ9HCE6 1279 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 PCDHA6Q9UN73 950 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 PCDHA8Q9Y5H6 950 aa22.42■■□□□ 1.18
RBFOX1-215ENST00000553186 TRIM75PA6NK02 468 aa22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 PPP1R11O60927 126 aaPredicted RBP22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 DDNO94850 711 aaPredicted RBP22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 CMA1P23946 247 aa22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 FAM160A1Q05DH4 1040 aa22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 RASGRP4Q8TDF6 673 aa22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 NUP88Q99567 741 aaPredicted RBP22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 CLSTN2Q9H4D0 955 aa22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 NOL7Q9UMY1 257 aaKnown RBP22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 MORC2Q9Y6X9 1032 aaPredicted RBP22.41■■□□□ 1.18
RBFOX1-215ENST00000553186 ESYT2A0FGR8 921 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 TRAPPC10P48553 1259 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 CCDC73Q6ZRK6 1079 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 A0A1B0GVL5 298 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 SMCO2A6NFE2 343 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 ZBTB5O15062 677 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 ASNSP08243 561 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 KIAA1755Q5JYT7 1200 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 NBPF12Q5TAG4 269 aaPredicted RBP22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 FMR1NBQ8N0W7 255 aaPredicted RBP22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 GRPEL1Q9HAV7 217 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 CEP131Q9UPN4 1083 aa22.4■■□□□ 1.18
RBFOX1-215ENST00000553186 NDUFA8P51970 172 aa22.39■■□□□ 1.18
RBFOX1-215ENST00000553186 CAMK4Q16566 473 aa22.39■■□□□ 1.18
RBFOX1-215ENST00000553186 SHC4Q6S5L8 630 aa22.39■■□□□ 1.18
RBFOX1-215ENST00000553186 APOBEC3FQ8IUX4 373 aaKnown RBP22.39■■□□□ 1.18
RBFOX1-215ENST00000553186 COA7Q96BR5 231 aa22.39■■□□□ 1.18
RBFOX1-215ENST00000553186 FBXO2Q9UK22 296 aaPredicted RBP22.39■■□□□ 1.18
RBFOX1-215ENST00000553186 PTPREP23469 700 aa22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 GNA11P29992 359 aa22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 MRE11P49959 708 aa22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 L1TD1Q5T7N2 865 aaKnown RBP22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 C9orf131Q5VYM1 1079 aa22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 RBM43Q6ZSC3 357 aaKnown RBP22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 KRI1Q8N9T8 703 aaKnown RBP22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 CLIC6Q96NY7 704 aa22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 C6orf50Q9HD87 102 aa22.39■■□□□ 1.17
RBFOX1-215ENST00000553186 CUTAO60888 179 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 BMP3P12645 472 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 TTC38Q5R3I4 469 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 SPICE1Q8N0Z3 855 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 FUCA2Q9BTY2 467 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 GGA3Q9NZ52 723 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 XRCC6P12956 609 aaKnown RBP eCLIP22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 BTNL9Q6UXG8 535 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 TNMDQ9H2S6 317 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 MRVI1Q9Y6F6 885 aa22.38■■□□□ 1.17
RBFOX1-215ENST00000553186 FAM237AA0A1B0GTK4 181 aa22.37■■□□□ 1.17
RBFOX1-215ENST00000553186 GLIS2Q9BZE0 524 aaPredicted RBP22.37■■□□□ 1.17
RBFOX1-215ENST00000553186 GOPCQ9HD26 462 aa22.37■■□□□ 1.17
RBFOX1-215ENST00000553186 CCDC194A0A1B0GVG4 234 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 GRIN1Q05586 938 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 ZNF174Q15697 407 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 MAP3K11Q16584 847 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 RESP18Q5W5W9 173 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 PPP1R18Q6NYC8 613 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 CCDC84Q86UT8 332 aaPredicted RBP22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 RBSNQ9H1K0 784 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 HPSEQ9Y251 543 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 SRPRBQ9Y5M8 271 aaKnown RBP22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 TMEM232C9JQI7 657 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 CTNND1O60716 968 aaKnown RBP22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 BMP15O95972 392 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms