RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PATL2C9JE40 543 aaKnown RBP13.46□□□□□ -0.25
TMEM116-218ENST00000552839 EPHB4P54760 987 aa13.46□□□□□ -0.25
TMEM116-218ENST00000552839 TLE2Q04725 743 aa13.46□□□□□ -0.25
TMEM116-218ENST00000552839 FAM47AQ5JRC9 791 aa13.46□□□□□ -0.25
TMEM116-218ENST00000552839 SYMPKQ92797 1274 aaKnown RBP13.46□□□□□ -0.25
TMEM116-218ENST00000552839 UPF2Q9HAU5 1272 aaKnown RBP13.46□□□□□ -0.25
TMEM116-218ENST00000552839 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.25
TMEM116-218ENST00000552839 HOXC10Q9NYD6 342 aa13.46□□□□□ -0.25
TMEM116-218ENST00000552839 PRUNE2Q8WUY3 3088 aa13.46□□□□□ -0.25
TMEM116-218ENST00000552839 MYH8P13535 1937 aa13.46□□□□□ -0.25
TMEM116-218ENST00000552839 CDH23Q9H251 3354 aa13.46□□□□□ -0.26
TMEM116-218ENST00000552839 HSPD1P10809 573 aaKnown RBP13.45□□□□□ -0.26
TMEM116-218ENST00000552839 GABPAQ06546 454 aa13.45□□□□□ -0.26
TMEM116-218ENST00000552839 KIAA1755Q5JYT7 1200 aa13.45□□□□□ -0.26
TMEM116-218ENST00000552839 GIMAP6Q6P9H5 292 aa13.45□□□□□ -0.26
TMEM116-218ENST00000552839 IFNL3Q8IZI9 196 aa13.45□□□□□ -0.26
TMEM116-218ENST00000552839 SHCBP1Q8NEM2 672 aa13.45□□□□□ -0.26
TMEM116-218ENST00000552839 RNPC3Q96LT9 517 aaKnown RBP13.45□□□□□ -0.26
TMEM116-218ENST00000552839 DSCC1Q9BVC3 393 aa13.45□□□□□ -0.26
TMEM116-218ENST00000552839 ZNF287Q9HBT7 754 aa13.45□□□□□ -0.26
TMEM116-218ENST00000552839 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
TMEM116-218ENST00000552839 U3KPZ7 1027 aaPredicted RBP13.45□□□□□ -0.26
TMEM116-218ENST00000552839 SPTBN5Q9NRC6 3674 aaKnown RBP13.44□□□□□ -0.26
TMEM116-218ENST00000552839 TMEM265A0A087WTH1 108 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 DSG3P32926 999 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 EVX2Q03828 476 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 IMMTQ16891 758 aaKnown RBP13.44□□□□□ -0.26
TMEM116-218ENST00000552839 VPS53Q5VIR6 699 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 USP38Q8NB14 1042 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 MAML3Q96JK9 1138 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 TANGO6Q9C0B7 1094 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 SLC5A4Q9NY91 659 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 PHF24Q9UPV7 400 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
TMEM116-218ENST00000552839 BAZ2AQ9UIF9 1905 aaKnown RBP13.44□□□□□ -0.26
TMEM116-218ENST00000552839 GSG1L2A8MUP6 293 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 USP17L12C9JPN9 530 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 USP17L21D6R901 530 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 MPHOSPH10O00566 681 aaKnown RBP13.43□□□□□ -0.26
TMEM116-218ENST00000552839 CLTBP09497 229 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 PLS1Q14651 629 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 GRIN2CQ14957 1233 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 ABRAQ8N0Z2 381 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 STK11IPQ8N1F8 1099 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 MB21D1Q8N884 522 aa13.43□□□□□ -0.26
TMEM116-218ENST00000552839 MYO9BQ13459 2157 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 ZMYM6O95789 1325 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 ZNF213O14771 459 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 KIAA0355O15063 1070 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 PGK1P00558 417 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 RAG1P15918 1043 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 HAND2P61296 217 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 PDE4BQ07343 736 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 PPARAQ07869 468 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 MROH8Q9H579 483 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 MKNK2Q9HBH9 465 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 EPB41L4AQ9HCS5 686 aaPredicted RBP13.42□□□□□ -0.26
TMEM116-218ENST00000552839 XPNPEP3Q9NQH7 507 aa13.42□□□□□ -0.26
TMEM116-218ENST00000552839 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
TMEM116-218ENST00000552839 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
TMEM116-218ENST00000552839 FLOT1O75955 427 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 RARBP10826 455 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 FCER1AP12319 257 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 DNAJB2P25686 324 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 FPGSQ05932 587 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 TRDNQ13061 729 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 SLC44A5Q8NCS7 719 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 RNF41Q9H4P4 317 aaPredicted RBP13.41□□□□□ -0.26
TMEM116-218ENST00000552839 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
TMEM116-218ENST00000552839 RBM8AQ9Y5S9 174 aaKnown RBP13.41□□□□□ -0.26
TMEM116-218ENST00000552839 CYP2D7A0A087X1C5 515 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 A0A1W2PQ45 241 aaPredicted RBP13.4□□□□□ -0.26
TMEM116-218ENST00000552839 A0A1W2PQY0 241 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 PQBP1O60828 265 aaKnown RBP13.4□□□□□ -0.26
TMEM116-218ENST00000552839 FGAP02671 866 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 CYP2D6P10635 497 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 TAL1P17542 331 aaPredicted RBP13.4□□□□□ -0.26
TMEM116-218ENST00000552839 COL9A1P20849 921 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 FAAP100Q0VG06 881 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 TMEM132BQ14DG7 1078 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 ALX1Q15699 326 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 SBK1Q52WX2 424 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 RRP12Q5JTH9 1297 aaKnown RBP13.4□□□□□ -0.26
TMEM116-218ENST00000552839 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
TMEM116-218ENST00000552839 RALYLQ86SE5 291 aaKnown RBP13.4□□□□□ -0.26
TMEM116-218ENST00000552839 RNF180Q86T96 592 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 SPICE1Q8N0Z3 855 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
TMEM116-218ENST00000552839 IL25Q9H293 177 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 ZNF576Q9H609 170 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 TMEM39AQ9NV64 488 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 NRBP1Q9UHY1 535 aa13.4□□□□□ -0.26
TMEM116-218ENST00000552839 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms