RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 FLRT1Q9NZU1 646 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 DDX20Q9UHI6 824 aaKnown RBP5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 EXOC6BQ9Y2D4 811 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 MYH7P12883 1935 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 CHD8Q9HCK8 2581 aa5.36□□□□□ -1.55
TMEM106C-220ENST00000552561 CDH23Q9H251 3354 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 PLIN4Q96Q06 1357 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 ZNF532Q9HCE3 1301 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 C2orf72A6NCS6 295 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 WDR46O15213 610 aaKnown RBP5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 SEPT4O43236 478 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 SLC25A27O95847 323 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 CCND3P30281 292 aaPredicted RBP5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 COPB2P35606 906 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 USP5P45974 858 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 LSM11P83369 360 aaKnown RBP eCLIP5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 SMAD3P84022 425 aaKnown RBP5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 MDM2Q00987 491 aaPredicted RBP5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 SEPT2Q15019 361 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 CSPP1Q1MSJ5 1256 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 MAMDC4Q6UXC1 1216 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 NPLOC4Q8TAT6 608 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 MKL1Q969V6 931 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 LRFN3Q9BTN0 628 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 TRIM34Q9BYJ4 488 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 TANGO6Q9C0B7 1094 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 SEMA6BQ9H3T3 888 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 RPAP3Q9H6T3 665 aaPredicted RBP5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 C1orf115Q9H7X2 142 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 ZNF214Q9UL59 606 aaPredicted RBP5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 BAHCC1Q9P281 2608 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 MYH8P13535 1937 aa5.35□□□□□ -1.55
TMEM106C-220ENST00000552561 DNAJC25-GNG10A0A024R161 153 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 IGKV6D-41A0A0C4DH26 115 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 PEX10O60683 326 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 COBLO75128 1261 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 NUDT7P0C024 238 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 ERCC3P19447 782 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 CST5P28325 142 aaPredicted RBP5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 ADORA2AP29274 412 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 NOVP48745 357 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 RAB3GAP1Q15042 981 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 LRRC26Q2I0M4 334 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 ZNF792Q3KQV3 632 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 KIAA1755Q5JYT7 1200 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 RIOX2Q8IUF8 465 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 LCORLQ8N3X6 602 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 ARRDC4Q8NCT1 418 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 TRPV1Q8NER1 839 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 SDR42E1Q8WUS8 393 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 MAML3Q96JK9 1138 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 TOX2Q96NM4 488 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 FEZ1Q99689 392 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 KCNH6Q9H252 994 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 DCTPP1Q9H773 170 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 KANSL2Q9H9L4 492 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 IL1RAPL2Q9NP60 686 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 PAG1Q9NWQ8 432 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 MCM9Q9NXL9 1143 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 SLC5A4Q9NY91 659 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 NYAP2Q9P242 653 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 ARPP21Q9UBL0 812 aaPredicted RBP5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 SAP30BPQ9UHR5 308 aaKnown RBP5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 PPP1R9AQ9ULJ8 1098 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 PHF24Q9UPV7 400 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 SUPT16HQ9Y5B9 1047 aaKnown RBP5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 NDUFB9Q9Y6M9 179 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 IVNS1ABPQ9Y6Y0 642 aa5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 ZNFX1Q9P2E3 1918 aaKnown RBP5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 BAZ2AQ9UIF9 1905 aaKnown RBP5.34□□□□□ -1.55
TMEM106C-220ENST00000552561 SMCHD1A6NHR9 2005 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 EPG5Q9HCE0 2579 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 TCF20Q9UGU0 1960 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 USP17L12C9JPN9 530 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 USP17L21D6R901 530 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 APBB1O00213 710 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 GOLIM4O00461 696 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 STK25O00506 426 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 VWA5AO00534 786 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 PLA2G6O60733 806 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 ADAMTS4O75173 837 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 POLR3DP05423 398 aaPredicted RBP5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 ZFYP08048 801 aaPredicted RBP5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 FDX1P10109 184 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 AKR1B1P15121 316 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 CDK8P49336 464 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 OAZ1P54368 228 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 IRX6P78412 446 aaPredicted RBP5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 ATP2B2Q01814 1243 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 ICA1Q05084 483 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 TMEM132BQ14DG7 1078 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 CCSAPQ6IQ19 270 aaPredicted RBP5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 ZSCAN25Q6NSZ9 544 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 CTR9Q6PD62 1173 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 SLC39A5Q6ZMH5 540 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 ANKRD33Q7Z3H0 272 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 KBTBD3Q8NAB2 608 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 PANK1Q8TE04 598 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms