RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 BADQ92934 168 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 FAM161BQ96MY7 647 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 SLF1Q9BQI6 1058 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 PDLIM7Q9NR12 457 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 TACC3Q9Y6A5 838 aa13.82□□□□□ -0.2
PRPF40B-212ENST00000551111 CUL9Q8IWT3 2517 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 PATL2C9JE40 543 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 ADCY6O43306 1168 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 APPP05067 770 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 TDO2P48775 406 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 TLE2Q04725 743 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 KCTD2Q14681 263 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 CCDC129Q6ZRS4 1044 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 FGD4Q96M96 766 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 LBHD1Q9BQE6 289 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 RAVER2Q9HCJ3 691 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 XPNPEP3Q9NQH7 507 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 SLC5A4Q9NY91 659 aa13.81□□□□□ -0.2
PRPF40B-212ENST00000551111 DNAJC25-GNG10A0A024R161 153 aa13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 MYADML2A6NDP7 307 aa13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 EPHB4P54760 987 aa13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 MKL1Q969V6 931 aa13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 GUCD1Q96NT3 240 aa13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 MTMR4Q9NYA4 1195 aa13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 PHF24Q9UPV7 400 aa13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 DIS3Q9Y2L1 958 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 DDX49Q9Y6V7 483 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-212ENST00000551111 DLL1O00548 723 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 ADAMTS4O75173 837 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 RARBP10826 455 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 ZMYM1Q5SVZ6 1142 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 ZNF444Q8N0Y2 327 aaPredicted RBP13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 PRPF38AQ8NAV1 312 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 KIFC2Q96AC6 838 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 TEX13BQ9BXU2 312 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 SLC38A10Q9HBR0 1119 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 STXBP5LQ9Y2K9 1186 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 SALL3Q9BXA9 1300 aa13.79□□□□□ -0.2
PRPF40B-212ENST00000551111 A0A1W2PQ45 241 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 A0A1W2PQY0 241 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 NMT2O60551 498 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 ZFYP08048 801 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 PTGS1P23219 599 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 CTDSPL2Q05D32 466 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 NEDD1Q8NHV4 660 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 PRKAG2Q9UGJ0 569 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 LRRC37A2A6NM11 1700 aa13.78□□□□□ -0.2
PRPF40B-212ENST00000551111 ATP2A1O14983 1001 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 ZNF536O15090 1300 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 GNAT2P19087 354 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 SNAP25P60880 206 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 TFAP4Q01664 338 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 CNTN2Q02246 1040 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 PPARAQ07869 468 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 VPS53Q5VIR6 699 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 C1orf53Q5VUE5 145 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 SLFN13Q68D06 897 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 CCSAPQ6IQ19 270 aaPredicted RBP13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 TTC41PQ6P2S7 1318 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 MAMDC4Q6UXC1 1216 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 DDX11Q96FC9 970 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 FSD1Q9BTV5 496 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 IL17RBQ9NRM6 502 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 HOMER2Q9NSB8 354 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 NRBP1Q9UHY1 535 aa13.77□□□□□ -0.21
PRPF40B-212ENST00000551111 GBF1Q92538 1859 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 PLIN4Q96Q06 1357 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 PQBP1O60828 265 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 ZBED4O75132 1171 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 TTLL1O95922 423 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 AKR1A1P14550 325 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 KCNA10Q16322 511 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 RNF180Q86T96 592 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 GMCL1P1Q8NEA9 526 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 KATNBL1Q9H079 304 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 VCANP13611 3396 aa13.76□□□□□ -0.21
PRPF40B-212ENST00000551111 ASTN1O14525 1302 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 SYNGAP1Q96PV0 1343 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 TSPY3P0CV98 308 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 TSPY8P0CW00 308 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 BMP3P12645 472 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 MX1P20591 662 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 MCCP23508 829 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 COPB2P35606 906 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 ACLYP53396 1101 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms