RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ADGRE2Q9UHX3 823 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 SLC5A6Q9Y289 635 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 QRICH2Q9H0J4 1663 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 RPGRIP1LQ68CZ1 1315 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 NRAPQ86VF7 1730 aa7.21□□□□□ -1.26
SCAF11-214ENST00000550893 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.21□□□□□ -1.26
SCAF11-214ENST00000550893 ABCC11Q96J66 1382 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 PAX4O43316 350 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 SLITRK5O94991 958 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 CEACAM5P06731 702 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 ITIH2P19823 946 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 CAP2P40123 477 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 TXKP42681 527 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 IFI16Q16666 785 aaKnown RBP7.2□□□□□ -1.26
SCAF11-214ENST00000550893 TMCO4Q5TGY1 634 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 HID1Q8IV36 788 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 STK11IPQ8N1F8 1099 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 MISP3Q96FF7 219 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 FOXQ1Q9C009 403 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 GTF2IRD1Q9UHL9 959 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 TACC3Q9Y6A5 838 aa7.2□□□□□ -1.26
SCAF11-214ENST00000550893 PLCH1Q4KWH8 1693 aa7.19□□□□□ -1.26
SCAF11-214ENST00000550893 ATP7BP35670 1465 aa7.19□□□□□ -1.26
SCAF11-214ENST00000550893 ITSN1Q15811 1721 aa7.19□□□□□ -1.26
SCAF11-214ENST00000550893 TULP4Q9NRJ4 1543 aa7.19□□□□□ -1.26
SCAF11-214ENST00000550893 IGF2BP3O00425 579 aaKnown RBP eCLIP7.19□□□□□ -1.26
SCAF11-214ENST00000550893 PF4P02776 101 aa7.19□□□□□ -1.26
SCAF11-214ENST00000550893 TAL1P17542 331 aaPredicted RBP7.19□□□□□ -1.26
SCAF11-214ENST00000550893 RPL6Q02878 288 aaKnown RBP7.19□□□□□ -1.26
SCAF11-214ENST00000550893 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
SCAF11-214ENST00000550893 ZNF326Q5BKZ1 582 aaKnown RBP7.19□□□□□ -1.26
SCAF11-214ENST00000550893 BNC2Q6ZN30 1099 aaPredicted RBP7.19□□□□□ -1.26
SCAF11-214ENST00000550893 DDX17Q92841 729 aaKnown RBP7.19□□□□□ -1.26
SCAF11-214ENST00000550893 RSRP1Q9BUV0 290 aa7.19□□□□□ -1.26
SCAF11-214ENST00000550893 NRKQ7Z2Y5 1582 aa7.19□□□□□ -1.26
SCAF11-214ENST00000550893 PHRF1Q9P1Y6 1649 aaKnown RBP7.19□□□□□ -1.26
SCAF11-214ENST00000550893 PNPLA6Q8IY17 1366 aa7.19□□□□□ -1.26
SCAF11-214ENST00000550893 PGRP06401 933 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 GBP2P32456 591 aaPredicted RBP7.18□□□□□ -1.26
SCAF11-214ENST00000550893 CD96P40200 585 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 LMNB2Q03252 620 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 PRKCQQ04759 706 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 CCDC84Q86UT8 332 aaPredicted RBP7.18□□□□□ -1.26
SCAF11-214ENST00000550893 RELL1Q8IUW5 271 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 HOMEZQ8IX15 550 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 MFSD2AQ8NA29 543 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 AGBL5Q8NDL9 886 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 RIN3Q8TB24 985 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 RHOVQ96L33 236 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 TMEM74Q96NL1 305 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 MIPEPQ99797 713 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 TNKS2Q9H2K2 1166 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 TJP2Q9UDY2 1190 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 VAV3Q9UKW4 847 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 CNTNAP4Q9C0A0 1308 aa7.18□□□□□ -1.26
SCAF11-214ENST00000550893 TMEM265A0A087WTH1 108 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 FAM221AA4D161 298 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 CILPO75339 1184 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 F13A1P00488 732 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 CST3P01034 146 aaPredicted RBP7.17□□□□□ -1.26
SCAF11-214ENST00000550893 CD8BP10966 210 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 YBX3P16989 372 aaKnown RBP eCLIP7.17□□□□□ -1.26
SCAF11-214ENST00000550893 MRPL58Q14197 206 aaKnown RBP7.17□□□□□ -1.26
SCAF11-214ENST00000550893 AOC3Q16853 763 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 PRAMEF13Q5VWM6 474 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 TMEM132EQ6IEE7 984 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 XAGE3Q8WTP9 111 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 HRASLS5Q96KN8 279 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 C19orf44Q9H6X5 657 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 C14orf93Q9H972 538 aaKnown RBP7.17□□□□□ -1.26
SCAF11-214ENST00000550893 PRDM5Q9NQX1 630 aaPredicted RBP7.17□□□□□ -1.26
SCAF11-214ENST00000550893 AKAP12Q02952 1782 aa7.17□□□□□ -1.26
SCAF11-214ENST00000550893 BRWD3Q6RI45 1802 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 MINDY4BA8MYZ0 360 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 RBAK-RBAKDNI3L0D1 243 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 FAM160A1Q05DH4 1040 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 NKPD1Q17RQ9 610 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 RGL3Q3MIN7 710 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 LETMD1Q6P1Q0 360 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 CBLL1Q75N03 491 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 WAPLQ7Z5K2 1190 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 SPACA3Q8IXA5 215 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 MRPL41Q8IXM3 137 aaKnown RBP7.16□□□□□ -1.26
SCAF11-214ENST00000550893 GATAD2BQ8WXI9 593 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 TMEM87BQ96K49 555 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 DPH2Q9BQC3 489 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-214ENST00000550893 TPX2Q9ULW0 747 aaKnown RBP7.16□□□□□ -1.26
SCAF11-214ENST00000550893 MAPK8IP1Q9UQF2 711 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 CORINQ9Y5Q5 1042 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 PRR36Q9H6K5 1346 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 JCADQ9P266 1359 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 GLI3P10071 1580 aa7.16□□□□□ -1.26
SCAF11-214ENST00000550893 PRR33A8MZF0 331 aa7.15□□□□□ -1.26
SCAF11-214ENST00000550893 PDE4BQ07343 736 aa7.15□□□□□ -1.26
SCAF11-214ENST00000550893 PWP1Q13610 501 aa7.15□□□□□ -1.26
SCAF11-214ENST00000550893 ACSF2Q96CM8 615 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-214ENST00000550893 ORAI2Q96SN7 254 aa7.15□□□□□ -1.26
SCAF11-214ENST00000550893 COPRSQ9NQ92 184 aa7.15□□□□□ -1.26
SCAF11-214ENST00000550893 KBTBD4Q9NVX7 518 aa7.15□□□□□ -1.26
SCAF11-214ENST00000550893 SNX11Q9Y5W9 270 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms