RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 SHDQ96IW2 340 aa6.85□□□□□ -1.31
RAB3IP-214ENST00000550847 TGIF2Q9GZN2 237 aa6.85□□□□□ -1.31
RAB3IP-214ENST00000550847 PCDHB12Q9Y5F1 795 aa6.85□□□□□ -1.31
RAB3IP-214ENST00000550847 PSPNO60542 156 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 TP53P04637 393 aaPredicted RBP6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 COL9A2Q14055 689 aaPredicted RBP6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 MPZL3Q6UWV2 235 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 WAPLQ7Z5K2 1190 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 CCDC144CPQ8IYA2 1237 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 C7orf61Q8IZ16 206 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 SHISA4Q96DD7 197 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 DHRS1Q96LJ7 313 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 DIRC2Q96SL1 478 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 FBXL21Q9UKT6 434 aa6.84□□□□□ -1.31
RAB3IP-214ENST00000550847 FITM1A5D6W6 292 aa6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 CBFA2T2O43439 604 aa6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 FARP2O94887 1054 aaPredicted RBP6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 EIF6P56537 245 aaKnown RBP6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 PCBP3P57721 371 aaKnown RBP6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 NR0B2Q15466 257 aa6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 FAM169BQ8N8A8 192 aa6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 DHX38Q92620 1227 aaKnown RBP6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 SRRTQ9BXP5 876 aaKnown RBP6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 ZNF214Q9UL59 606 aaPredicted RBP6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 PCDHB10Q9UN67 800 aa6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 ZNF451Q9Y4E5 1061 aa6.83□□□□□ -1.32
RAB3IP-214ENST00000550847 ZNF205O95201 554 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 ZNF445P59923 1031 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 OXR1Q8N573 874 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 ANKS4BQ8N8V4 417 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 BRF1Q92994 677 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 MAP6Q96JE9 813 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 HHIPL1Q96JK4 782 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 NSUN3Q9H649 340 aaKnown RBP6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 GP6Q9HCN6 339 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 FAM53CQ9NYF3 392 aa6.82□□□□□ -1.32
RAB3IP-214ENST00000550847 A0A1W2PQH9 124 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 H0Y8X5 98 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 KRT1P04264 644 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 DUSP4Q13115 394 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 RTP2Q5QGT7 225 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 KLHL6Q8WZ60 621 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 CCSER2Q9H7U1 834 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 ERVK13-1Q9NX77 482 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 PPP1R1BQ9UD71 204 aaPredicted RBP6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 GPR160Q9UJ42 338 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 INPP5FQ9Y2H2 1132 aa6.81□□□□□ -1.32
RAB3IP-214ENST00000550847 VAV1P15498 845 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 BMP8BP34820 402 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 NLRX1Q86UT6 975 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 CRBNQ96SW2 442 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 PLCD4Q9BRC7 762 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 KRTAP9-9Q9BYP9 154 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 AP5S1Q9NUS5 200 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 PRR13Q9NZ81 148 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 ZMYM5Q9UJ78 669 aa6.8□□□□□ -1.32
RAB3IP-214ENST00000550847 SSU72P8A0A1W2PR75 194 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 YBX3P16989 372 aaKnown RBP eCLIP6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 NCLP19338 710 aaKnown RBP6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 CD247P20963 164 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 JAG1P78504 1218 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 CHRNEQ04844 493 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 CILP2Q8IUL8 1156 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 LILRA2Q8N149 483 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 C19orf47Q8N9M1 422 aaKnown RBP6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 TMEM52Q8NDY8 209 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 SMARCC1Q92922 1105 aaPredicted RBP6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 HAUS7Q99871 368 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 SLC12A9Q9BXP2 914 aa6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 GPR55Q9Y2T6 319 aaPredicted RBP6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 YBX2Q9Y2T7 364 aaKnown RBP6.79□□□□□ -1.32
RAB3IP-214ENST00000550847 FADS2P1A8MWK0 482 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 NRDCO43847 1150 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 CEP128Q6ZU80 1094 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 KSR1Q8IVT5 923 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 SIRT2Q8IXJ6 389 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 FIBCD1Q8N539 461 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 SYTL4Q96C24 671 aaPredicted RBP6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 INTS4Q96HW7 963 aaKnown RBP6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 FAM84AQ96KN4 292 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 FCRL2Q96LA5 508 aaPredicted RBP6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 DSCC1Q9BVC3 393 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 CDADC1Q9BWV3 514 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 FHOD1Q9Y613 1164 aa6.78□□□□□ -1.32
RAB3IP-214ENST00000550847 GSNP06396 782 aa6.77□□□□□ -1.33
RAB3IP-214ENST00000550847 ATF4P18848 351 aaPredicted RBP6.77□□□□□ -1.33
RAB3IP-214ENST00000550847 KIR2DL1P43626 348 aaPredicted RBP6.77□□□□□ -1.33
RAB3IP-214ENST00000550847 KIR2DL2P43627 348 aaPredicted RBP6.77□□□□□ -1.33
RAB3IP-214ENST00000550847 GNPTABQ3T906 1256 aa6.77□□□□□ -1.33
RAB3IP-214ENST00000550847 OR6P1Q8NGX9 317 aa6.77□□□□□ -1.33
RAB3IP-214ENST00000550847 KLHL25Q9H0H3 589 aa6.77□□□□□ -1.33
RAB3IP-214ENST00000550847 EPB41L4BQ9H329 900 aa6.77□□□□□ -1.33
RAB3IP-214ENST00000550847 CWC22Q9HCG8 908 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms