RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 COPB2P35606 906 aa15.93■□□□□ 0.14
NUP188-211ENST00000550219 SNRNP48Q6IEG0 339 aaKnown RBP15.93■□□□□ 0.14
NUP188-211ENST00000550219 CPXCR1Q8N123 301 aa15.93■□□□□ 0.14
NUP188-211ENST00000550219 REPS2Q8NFH8 660 aa15.93■□□□□ 0.14
NUP188-211ENST00000550219 KIFC2Q96AC6 838 aa15.93■□□□□ 0.14
NUP188-211ENST00000550219 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
NUP188-211ENST00000550219 CEP95Q96GE4 821 aa15.93■□□□□ 0.14
NUP188-211ENST00000550219 LBHD1Q9BQE6 289 aaPredicted RBP15.93■□□□□ 0.14
NUP188-211ENST00000550219 MYH4Q9Y623 1939 aa15.93■□□□□ 0.14
NUP188-211ENST00000550219 IGKV6D-41A0A0C4DH26 115 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 PATL2C9JE40 543 aaKnown RBP15.92■□□□□ 0.14
NUP188-211ENST00000550219 TSPY3P0CV98 308 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 TSPY8P0CW00 308 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 BMP2KLQ5H9B9 411 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 CCDC129Q6ZRS4 1044 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 FERMT2Q96AC1 680 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 LENG1Q96BZ8 264 aaPredicted RBP15.92■□□□□ 0.14
NUP188-211ENST00000550219 TEX13BQ9BXU2 312 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 PRDM5Q9NQX1 630 aaPredicted RBP15.92■□□□□ 0.14
NUP188-211ENST00000550219 PRKAG2Q9UGJ0 569 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 PLXNA1Q9UIW2 1896 aa15.92■□□□□ 0.14
NUP188-211ENST00000550219 RANBP2P49792 3224 aaKnown RBP15.91■□□□□ 0.14
NUP188-211ENST00000550219 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
NUP188-211ENST00000550219 ADCYAP1R1P41586 468 aa15.91■□□□□ 0.14
NUP188-211ENST00000550219 PDE4BQ07343 736 aa15.91■□□□□ 0.14
NUP188-211ENST00000550219 PPARAQ07869 468 aa15.91■□□□□ 0.14
NUP188-211ENST00000550219 LRRC41Q15345 812 aa15.91■□□□□ 0.14
NUP188-211ENST00000550219 ZMYM1Q5SVZ6 1142 aa15.91■□□□□ 0.14
NUP188-211ENST00000550219 TINF2Q9BSI4 451 aa15.91■□□□□ 0.14
NUP188-211ENST00000550219 RAVER2Q9HCJ3 691 aaKnown RBP15.91■□□□□ 0.14
NUP188-211ENST00000550219 XPNPEP3Q9NQH7 507 aa15.91■□□□□ 0.14
NUP188-211ENST00000550219 MTMR4Q9NYA4 1195 aa15.91■□□□□ 0.14
NUP188-211ENST00000550219 PLIN4Q96Q06 1357 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 LTBP2Q14767 1821 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 ZBED4O75132 1171 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 TTLL1O95922 423 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 RARBP10826 455 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 TAL1P17542 331 aaPredicted RBP15.9■□□□□ 0.14
NUP188-211ENST00000550219 ZNF792Q3KQV3 632 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 TRIM60Q495X7 471 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 Q7L0L9 218 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 TICAM2Q86XR7 235 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
NUP188-211ENST00000550219 DDX11Q96FC9 970 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 RIPK3Q9Y572 518 aa15.9■□□□□ 0.14
NUP188-211ENST00000550219 PGK1P00558 417 aa15.89■□□□□ 0.13
NUP188-211ENST00000550219 TFAP4Q01664 338 aa15.89■□□□□ 0.13
NUP188-211ENST00000550219 IKQ13123 557 aaPredicted RBP15.89■□□□□ 0.13
NUP188-211ENST00000550219 SLFN13Q68D06 897 aa15.89■□□□□ 0.13
NUP188-211ENST00000550219 SLC39A5Q6ZMH5 540 aa15.89■□□□□ 0.13
NUP188-211ENST00000550219 EVI5LQ96CN4 794 aa15.89■□□□□ 0.13
NUP188-211ENST00000550219 HOMER2Q9NSB8 354 aa15.89■□□□□ 0.13
NUP188-211ENST00000550219 ZHX1Q9UKY1 873 aaPredicted RBP15.89■□□□□ 0.13
NUP188-211ENST00000550219 CNPY2Q9Y2B0 182 aa15.89■□□□□ 0.13
NUP188-211ENST00000550219 BMP3P12645 472 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 AKR1A1P14550 325 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 SDSP20132 328 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 CTDSPL2Q05D32 466 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 LRIT3Q3SXY7 679 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 DEFB123Q8N688 67 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 NEDD1Q8NHV4 660 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 NRBP1Q9UHY1 535 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 FEM1BQ9UK73 627 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 MTMR7Q9Y216 660 aa15.88■□□□□ 0.13
NUP188-211ENST00000550219 DIS3Q9Y2L1 958 aaKnown RBP15.88■□□□□ 0.13
NUP188-211ENST00000550219 ZNFX1Q9P2E3 1918 aaKnown RBP15.88■□□□□ 0.13
NUP188-211ENST00000550219 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
NUP188-211ENST00000550219 ZNF865P0CJ78 1059 aaPredicted RBP15.87■□□□□ 0.13
NUP188-211ENST00000550219 RNF180Q86T96 592 aa15.87■□□□□ 0.13
NUP188-211ENST00000550219 ANKRD35Q8N283 1001 aa15.87■□□□□ 0.13
NUP188-211ENST00000550219 GMCL1P1Q8NEA9 526 aa15.87■□□□□ 0.13
NUP188-211ENST00000550219 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
NUP188-211ENST00000550219 STX8Q9UNK0 236 aa15.87■□□□□ 0.13
NUP188-211ENST00000550219 SZT2Q5T011 3432 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 TRIM6-TRIM34B2RNG4 842 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 TMEM232C9JQI7 657 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 FOXP2O15409 715 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 VPS53Q5VIR6 699 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 RASGRP2Q7LDG7 609 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 MKL1Q969V6 931 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 INCENPQ9NQS7 918 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 PDLIM7Q9NR12 457 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 TOMM22Q9NS69 142 aa15.86■□□□□ 0.13
NUP188-211ENST00000550219 ATP2A1O14983 1001 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 NMT2O60551 498 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 SLC1A4P43007 532 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 STAT2P52630 851 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 SNX17Q15036 470 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 KCTD1Q719H9 257 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 SYNPO2Q9UMS6 1093 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 PHF24Q9UPV7 400 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
NUP188-211ENST00000550219 SYNGAP1Q96PV0 1343 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 SYNRGQ9UMZ2 1314 aa15.85■□□□□ 0.13
NUP188-211ENST00000550219 DNAJC25-GNG10A0A024R161 153 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 A0A1W2PQ45 241 aaPredicted RBP15.84■□□□□ 0.13
NUP188-211ENST00000550219 A0A1W2PQY0 241 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 RANBP6O60518 1105 aaKnown RBP15.84■□□□□ 0.13
NUP188-211ENST00000550219 PQBP1O60828 265 aaKnown RBP15.84■□□□□ 0.13
NUP188-211ENST00000550219 SNAI1O95863 264 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms