RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NYXQ9GZU5 481 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 SUGCTQ9HAC7 445 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 TCP11L1Q9NUJ3 509 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 PARP4Q9UKK3 1724 aaKnown RBP15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 SLIT2O94813 1529 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 ZNF18P17022 549 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 TCP10Q12799 353 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 BMS1Q14692 1282 aaKnown RBP15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 SF3B3Q15393 1217 aaKnown RBP15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 PFKFB3Q16875 520 aaPredicted RBP15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 CCDC96Q2M329 555 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 KIAA1328Q86T90 577 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 ZSCAN29Q8IWY8 852 aaPredicted RBP15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 PIGSQ96S52 555 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 TMEM47Q9BQJ4 181 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 KANSL2Q9H9L4 492 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 ATP8A2Q9NTI2 1148 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 ARPP21Q9UBL0 812 aaPredicted RBP15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 DDAH1O94760 285 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 SARSP49591 514 aaKnown RBP15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 DOK7Q18PE1 504 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 RCSD1Q6JBY9 416 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.05
PRPF40B-209ENST00000548825 SRGAP2O75044 1071 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 ATRNO75882 1429 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 GYPCP04921 128 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 COPB1P53618 953 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 ATP2C1P98194 919 aaPredicted RBP15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 NCAPH2Q6IBW4 605 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 CSGALNACT2Q8N6G5 542 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 GSDMAQ96QA5 445 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 TRIM34Q9BYJ4 488 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 LAMB4A4D0S4 1761 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 FCER1AP12319 257 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 LRRC41Q15345 812 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 NPY5RQ15761 445 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 CLEC4GQ6UXB4 293 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 TMEM139Q8IV31 216 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 CAGE1Q8TC20 777 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 HDAC6Q9UBN7 1215 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 CALML3P27482 149 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 ERCC5P28715 1186 aaPredicted RBP15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 ARID5AQ03989 594 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 CDCA7Q9BWT1 371 aaPredicted RBP15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 ADD3Q9UEY8 706 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 NUP188Q5SRE5 1749 aa15.38■□□□□ 0.05
PRPF40B-209ENST00000548825 TOGARAM1Q9Y4F4 1720 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 CYTH3O43739 400 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 PNMA6AP0CW24 399 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 TXNRD1Q16881 649 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 KCTD19Q17RG1 926 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 SPTY2D1Q68D10 685 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 ANKRD13CQ8N6S4 541 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 PARD6BQ9BYG5 372 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 FAM207AQ9NSI2 230 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 NARFQ9UHQ1 456 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 PRDM4Q9UKN5 801 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 A0A1B0GTH6 734 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 PARP1P09874 1014 aaKnown RBP15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 PLCG1P19174 1290 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 TNNT3P45378 269 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 CHMP4BP1P59074 171 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 SNAP25P60880 206 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 STIM1Q13586 685 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 PCDHA4Q9UN74 947 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 ADGRG1Q9Y653 693 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 USP17L5A8MUK1 530 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 MFAP3LO75121 409 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 IPO7O95373 1038 aaKnown RBP15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 PTPROQ16827 1216 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 TRIML1Q8N9V2 468 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 NEK11Q8NG66 645 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 EXOC1Q9NV70 894 aa15.37■□□□□ 0.05
PRPF40B-209ENST00000548825 SPATA31A5Q5VU36 1347 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 SPATA31A7Q8IWB4 1347 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 UBE2SQ16763 222 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 C12orf60Q5U649 245 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 ZNF804AQ7Z570 1209 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 CABP7Q86V35 215 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 CEP95Q96GE4 821 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 CTAGE1Q96RT6 745 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 MMRN2Q9H8L6 949 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 PSMA7O14818 248 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 BMP15O95972 392 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 TBC1D8BQ0IIM8 1120 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 TBCKQ8TEA7 893 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 L2HGDHQ9H9P8 463 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 ARFGAP3Q9NP61 516 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 ANAPC4Q9UJX5 808 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 USP21Q9UK80 565 aa15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 LUC7L2Q9Y383 392 aaKnown RBP15.36■□□□□ 0.05
PRPF40B-209ENST00000548825 CTAGE9A4FU28 777 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 POTEMA6NI47 508 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 GTPBP6O43824 516 aaPredicted RBP15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 TADA3O75528 432 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms