RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 TAF1CQ15572 869 aaPredicted RBP9.53□□□□□ -0.88
CHPT1-203ENST00000546873 AGMOQ6ZNB7 445 aa9.53□□□□□ -0.88
CHPT1-203ENST00000546873 UBE3DQ7Z6J8 389 aa9.53□□□□□ -0.88
CHPT1-203ENST00000546873 ASB11Q8WXH4 323 aa9.53□□□□□ -0.88
CHPT1-203ENST00000546873 GOLGA2P5Q9HBQ8 144 aa9.53□□□□□ -0.88
CHPT1-203ENST00000546873 GLI3P10071 1580 aa9.53□□□□□ -0.88
CHPT1-203ENST00000546873 DAB2P98082 770 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 ZNF746Q6NUN9 644 aaPredicted RBP9.52□□□□□ -0.89
CHPT1-203ENST00000546873 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.52□□□□□ -0.89
CHPT1-203ENST00000546873 NPAS4Q8IUM7 802 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 MFSD2AQ8NA29 543 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 TNKS2Q9H2K2 1166 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 MRS2Q9HD23 443 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 PLAGL2Q9UPG8 496 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 MAPK8IP1Q9UQF2 711 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 TACC3Q9Y6A5 838 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 U3KQE9 123 aa9.52□□□□□ -0.89
CHPT1-203ENST00000546873 QRICH2Q9H0J4 1663 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 PIK3R4Q99570 1358 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.51□□□□□ -0.89
CHPT1-203ENST00000546873 FAM155AB1AL88 458 aaPredicted RBP9.51□□□□□ -0.89
CHPT1-203ENST00000546873 ERCC3P19447 782 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 SEPT6Q14141 434 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 FAM214BQ7L5A3 538 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 YTHDC1Q96MU7 727 aaKnown RBP9.51□□□□□ -0.89
CHPT1-203ENST00000546873 MIPEPQ99797 713 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 NOC4LQ9BVI4 516 aaKnown RBP9.51□□□□□ -0.89
CHPT1-203ENST00000546873 RC3H2Q9HBD1 1191 aaKnown RBP9.51□□□□□ -0.89
CHPT1-203ENST00000546873 RNF19AQ9NV58 838 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 PCDHB5Q9Y5E4 795 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 ADGRF5Q8IZF2 1346 aa9.51□□□□□ -0.89
CHPT1-203ENST00000546873 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 BRWD3Q6RI45 1802 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 ITGB5P18084 799 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 GRK4P32298 578 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 CAP2P40123 477 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 ST13P50502 369 aaKnown RBP9.5□□□□□ -0.89
CHPT1-203ENST00000546873 CLCN7P51798 805 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 IKZF1Q13422 519 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 MEI1Q5TIA1 1274 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 ORAI2Q96SN7 254 aa9.5□□□□□ -0.89
CHPT1-203ENST00000546873 KTN1Q86UP2 1357 aaKnown RBP9.5□□□□□ -0.89
CHPT1-203ENST00000546873 C1orf167Q5SNV9 1468 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 ARHGEF28Q8N1W1 1705 aaKnown RBP9.49□□□□□ -0.89
CHPT1-203ENST00000546873 KRTAP9-6A0A140TA67 174 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 EOMESO95936 686 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 CYP7A1P22680 504 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 PDE4BQ07343 736 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 CCDC27Q2M243 656 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 TSNAXIP1Q2TAA8 658 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 SFRP5Q5T4F7 317 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 DNAJC14Q6Y2X3 702 aaPredicted RBP9.49□□□□□ -0.89
CHPT1-203ENST00000546873 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 FBRSQ9HAH7 460 aa9.49□□□□□ -0.89
CHPT1-203ENST00000546873 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
CHPT1-203ENST00000546873 XRN1Q8IZH2 1706 aaKnown RBP9.48□□□□□ -0.89
CHPT1-203ENST00000546873 SORBS3O60504 671 aa9.48□□□□□ -0.89
CHPT1-203ENST00000546873 SLITRK5O94991 958 aa9.48□□□□□ -0.89
CHPT1-203ENST00000546873 CD96P40200 585 aa9.48□□□□□ -0.89
CHPT1-203ENST00000546873 SLBPQ14493 270 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHPT1-203ENST00000546873 SLC23A3Q6PIS1 610 aa9.48□□□□□ -0.89
CHPT1-203ENST00000546873 WFDC3Q8IUB2 231 aa9.48□□□□□ -0.89
CHPT1-203ENST00000546873 SPACA3Q8IXA5 215 aa9.48□□□□□ -0.89
CHPT1-203ENST00000546873 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHPT1-203ENST00000546873 COL22A1Q8NFW1 1626 aaPredicted RBP9.48□□□□□ -0.89
CHPT1-203ENST00000546873 CST3P01034 146 aaPredicted RBP9.47□□□□□ -0.89
CHPT1-203ENST00000546873 PGRP06401 933 aa9.47□□□□□ -0.89
CHPT1-203ENST00000546873 CDK8P49336 464 aa9.47□□□□□ -0.89
CHPT1-203ENST00000546873 NKG7Q16617 165 aa9.47□□□□□ -0.89
CHPT1-203ENST00000546873 LETMD1Q6P1Q0 360 aa9.47□□□□□ -0.89
CHPT1-203ENST00000546873 ATG4DQ86TL0 474 aaPredicted RBP9.47□□□□□ -0.89
CHPT1-203ENST00000546873 JARID2Q92833 1246 aaPredicted RBP9.47□□□□□ -0.89
CHPT1-203ENST00000546873 BCL11AQ9H165 835 aa9.47□□□□□ -0.89
CHPT1-203ENST00000546873 VTI1BQ9UEU0 232 aa9.47□□□□□ -0.89
CHPT1-203ENST00000546873 CENPJQ9HC77 1338 aaPredicted RBP9.47□□□□□ -0.89
CHPT1-203ENST00000546873 NALCNQ8IZF0 1738 aa9.47□□□□□ -0.89
CHPT1-203ENST00000546873 MYOM1P52179 1685 aa9.46□□□□□ -0.89
CHPT1-203ENST00000546873 TFE3P19532 575 aaPredicted RBP9.46□□□□□ -0.9
CHPT1-203ENST00000546873 RPL6Q02878 288 aaKnown RBP9.46□□□□□ -0.9
CHPT1-203ENST00000546873 NKPD1Q17RQ9 610 aa9.46□□□□□ -0.9
CHPT1-203ENST00000546873 PRAMEF13Q5VWM6 474 aa9.46□□□□□ -0.9
CHPT1-203ENST00000546873 UNC5CLQ8IV45 518 aa9.46□□□□□ -0.9
CHPT1-203ENST00000546873 MFSD4AQ8N468 514 aa9.46□□□□□ -0.9
CHPT1-203ENST00000546873 CRELD1Q96HD1 420 aa9.46□□□□□ -0.9
CHPT1-203ENST00000546873 COX4I2Q96KJ9 171 aa9.46□□□□□ -0.9
CHPT1-203ENST00000546873 TESK2Q96S53 571 aa9.46□□□□□ -0.9
CHPT1-203ENST00000546873 GZF1Q9H116 711 aaPredicted RBP9.46□□□□□ -0.9
CHPT1-203ENST00000546873 C14orf93Q9H972 538 aaKnown RBP9.46□□□□□ -0.9
CHPT1-203ENST00000546873 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.9
CHPT1-203ENST00000546873 GFRA2O00451 464 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 BPNT1O95861 308 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 RNASE1P07998 156 aaKnown RBP9.45□□□□□ -0.9
CHPT1-203ENST00000546873 YBX3P16989 372 aaKnown RBP eCLIP9.45□□□□□ -0.93e-11■□□□□ 10.3
CHPT1-203ENST00000546873 ZP2Q05996 745 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 KRT27Q7Z3Y8 459 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 XAGE3Q8WTP9 111 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 FAM161BQ96MY7 647 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 METP08581 1390 aa9.45□□□□□ -0.9
CHPT1-203ENST00000546873 USP31Q70CQ4 1352 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms