RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 TRIM43BA6NCK2 446 aa30.98■■■□□ 2.55
PDCD2-209ENST00000542896 M0R2C6 588 aa30.98■■■□□ 2.55
PDCD2-209ENST00000542896 PRDM1O75626 825 aa30.98■■■□□ 2.55
PDCD2-209ENST00000542896 CPXCR1Q8N123 301 aa30.98■■■□□ 2.55
PDCD2-209ENST00000542896 MSL3Q8N5Y2 521 aaKnown RBP30.98■■■□□ 2.55
PDCD2-209ENST00000542896 TRIM43Q96BQ3 446 aaPredicted RBP30.98■■■□□ 2.55
PDCD2-209ENST00000542896 FAM161BQ96MY7 647 aa30.98■■■□□ 2.55
PDCD2-209ENST00000542896 RIPK3Q9Y572 518 aa30.98■■■□□ 2.55
PDCD2-209ENST00000542896 COL6A3P12111 3177 aa30.97■■■□□ 2.55
PDCD2-209ENST00000542896 IGKV6D-41A0A0C4DH26 115 aa30.97■■■□□ 2.55
PDCD2-209ENST00000542896 C9orf50Q5SZB4 431 aa30.97■■■□□ 2.55
PDCD2-209ENST00000542896 ZNF697Q5TEC3 545 aa30.97■■■□□ 2.55
PDCD2-209ENST00000542896 KIFC2Q96AC6 838 aa30.97■■■□□ 2.55
PDCD2-209ENST00000542896 LENG1Q96BZ8 264 aaPredicted RBP30.97■■■□□ 2.55
PDCD2-209ENST00000542896 TACC3Q9Y6A5 838 aa30.97■■■□□ 2.55
PDCD2-209ENST00000542896 GUCD1Q96NT3 240 aa30.96■■■□□ 2.55
PDCD2-209ENST00000542896 GREB1LQ9C091 1923 aaPredicted RBP30.96■■■□□ 2.55
PDCD2-209ENST00000542896 LTBP2Q14767 1821 aa30.96■■■□□ 2.55
PDCD2-209ENST00000542896 A0A1W2PQ45 241 aaPredicted RBP30.95■■■□□ 2.55
PDCD2-209ENST00000542896 A0A1W2PQY0 241 aa30.95■■■□□ 2.55
PDCD2-209ENST00000542896 PATL2C9JE40 543 aaKnown RBP30.95■■■□□ 2.55
PDCD2-209ENST00000542896 ATP2A1O14983 1001 aa30.95■■■□□ 2.55
PDCD2-209ENST00000542896 CLTBP09497 229 aa30.95■■■□□ 2.55
PDCD2-209ENST00000542896 IFNL3Q8IZI9 196 aa30.95■■■□□ 2.55
PDCD2-209ENST00000542896 CEP95Q96GE4 821 aa30.95■■■□□ 2.55
PDCD2-209ENST00000542896 NACAP1Q9BZK3 213 aa30.95■■■□□ 2.55
PDCD2-209ENST00000542896 RAVER2Q9HCJ3 691 aaKnown RBP30.95■■■□□ 2.55
PDCD2-209ENST00000542896 ZHX1Q9UKY1 873 aaPredicted RBP30.95■■■□□ 2.55
PDCD2-209ENST00000542896 FAM184BQ9ULE4 1060 aa30.95■■■□□ 2.55
PDCD2-209ENST00000542896 SYNGAP1Q96PV0 1343 aa30.95■■■□□ 2.54
PDCD2-209ENST00000542896 ADAMTS4O75173 837 aa30.94■■■□□ 2.54
PDCD2-209ENST00000542896 MKL1Q969V6 931 aa30.94■■■□□ 2.54
PDCD2-209ENST00000542896 MTMR4Q9NYA4 1195 aa30.94■■■□□ 2.54
PDCD2-209ENST00000542896 FEM1BQ9UK73 627 aa30.94■■■□□ 2.54
PDCD2-209ENST00000542896 ZNFX1Q9P2E3 1918 aaKnown RBP30.94■■■□□ 2.54
PDCD2-209ENST00000542896 DNAH12Q6ZR08 3092 aa30.94■■■□□ 2.54
PDCD2-209ENST00000542896 SNAI1O95863 264 aaPredicted RBP30.93■■■□□ 2.54
PDCD2-209ENST00000542896 TTLL1O95922 423 aa30.93■■■□□ 2.54
PDCD2-209ENST00000542896 LRRC47Q8N1G4 583 aaKnown RBP30.93■■■□□ 2.54
PDCD2-209ENST00000542896 TSEN34Q9BSV6 310 aaKnown RBP30.93■■■□□ 2.54
PDCD2-209ENST00000542896 SYNPO2Q9UMS6 1093 aa30.93■■■□□ 2.54
PDCD2-209ENST00000542896 DNAJC25-GNG10A0A024R161 153 aa30.92■■■□□ 2.54
PDCD2-209ENST00000542896 ERC2O15083 957 aa30.92■■■□□ 2.54
PDCD2-209ENST00000542896 PQBP1O60828 265 aaKnown RBP30.92■■■□□ 2.54
PDCD2-209ENST00000542896 TSPY3P0CV98 308 aa30.92■■■□□ 2.54
PDCD2-209ENST00000542896 TSPY8P0CW00 308 aa30.92■■■□□ 2.54
PDCD2-209ENST00000542896 MAMDC4Q6UXC1 1216 aa30.92■■■□□ 2.54
PDCD2-209ENST00000542896 ANKRD35Q8N283 1001 aa30.92■■■□□ 2.54
PDCD2-209ENST00000542896 SLC38A10Q9HBR0 1119 aa30.92■■■□□ 2.54
PDCD2-209ENST00000542896 TTC41PQ6P2S7 1318 aa30.92■■■□□ 2.54
PDCD2-209ENST00000542896 PDE4BQ07343 736 aa30.91■■■□□ 2.54
PDCD2-209ENST00000542896 ZNF467Q7Z7K2 595 aaPredicted RBP30.91■■■□□ 2.54
PDCD2-209ENST00000542896 GMCL1P1Q8NEA9 526 aa30.91■■■□□ 2.54
PDCD2-209ENST00000542896 SEC62Q99442 399 aaKnown RBP30.91■■■□□ 2.54
PDCD2-209ENST00000542896 STARD7Q9NQZ5 370 aa30.91■■■□□ 2.54
PDCD2-209ENST00000542896 FBXO40Q9UH90 709 aa30.91■■■□□ 2.54
PDCD2-209ENST00000542896 ISY1Q9ULR0 285 aaKnown RBP30.91■■■□□ 2.54
PDCD2-209ENST00000542896 SYNRGQ9UMZ2 1314 aa30.91■■■□□ 2.54
PDCD2-209ENST00000542896 SLC3A2P08195 630 aaKnown RBP30.9■■■□□ 2.54
PDCD2-209ENST00000542896 RAG1P15918 1043 aa30.9■■■□□ 2.54
PDCD2-209ENST00000542896 ACLYP53396 1101 aa30.9■■■□□ 2.54
PDCD2-209ENST00000542896 SLFN13Q68D06 897 aa30.9■■■□□ 2.54
PDCD2-209ENST00000542896 NEDD1Q8NHV4 660 aa30.9■■■□□ 2.54
PDCD2-209ENST00000542896 NUP133Q8WUM0 1156 aa30.9■■■□□ 2.54
PDCD2-209ENST00000542896 FSD1Q9BTV5 496 aa30.9■■■□□ 2.54
PDCD2-209ENST00000542896 NAPBQ9H115 298 aa30.9■■■□□ 2.54
PDCD2-209ENST00000542896 PLXNA1Q9UIW2 1896 aa30.89■■■□□ 2.54
PDCD2-209ENST00000542896 MOXD2PA6NHM9 499 aa30.89■■■□□ 2.54
PDCD2-209ENST00000542896 BMP3P12645 472 aa30.89■■■□□ 2.54
PDCD2-209ENST00000542896 ITGB8P26012 769 aa30.89■■■□□ 2.54
PDCD2-209ENST00000542896 CHST13Q8NET6 341 aa30.89■■■□□ 2.54
PDCD2-209ENST00000542896 TMEM39AQ9NV64 488 aa30.89■■■□□ 2.54
PDCD2-209ENST00000542896 KIAA0355O15063 1070 aa30.88■■■□□ 2.53
PDCD2-209ENST00000542896 OAZ1P54368 228 aa30.88■■■□□ 2.53
PDCD2-209ENST00000542896 ACVR2BQ13705 512 aa30.88■■■□□ 2.53
PDCD2-209ENST00000542896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.88■■■□□ 2.531e-8■■□□□ 14
PDCD2-209ENST00000542896 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.88■■■□□ 2.53
PDCD2-209ENST00000542896 SMCHD1A6NHR9 2005 aa30.88■■■□□ 2.53
PDCD2-209ENST00000542896 DUSP11O75319 330 aaKnown RBP30.87■■■□□ 2.53
PDCD2-209ENST00000542896 SMAD3P84022 425 aaKnown RBP30.87■■■□□ 2.53
PDCD2-209ENST00000542896 TFAP4Q01664 338 aa30.87■■■□□ 2.53
PDCD2-209ENST00000542896 PPARAQ07869 468 aa30.87■■■□□ 2.53
PDCD2-209ENST00000542896 KCNA10Q16322 511 aa30.87■■■□□ 2.53
PDCD2-209ENST00000542896 KLHDC9Q8NEP7 349 aa30.87■■■□□ 2.53
PDCD2-209ENST00000542896 PI4K2BQ8TCG2 481 aa30.87■■■□□ 2.53
PDCD2-209ENST00000542896 PLIN4Q96Q06 1357 aa30.87■■■□□ 2.53
PDCD2-209ENST00000542896 DCDC2CA8MYV0 355 aa30.86■■■□□ 2.53
PDCD2-209ENST00000542896 FDX1P10109 184 aa30.86■■■□□ 2.53
PDCD2-209ENST00000542896 RNPC3Q96LT9 517 aaKnown RBP30.86■■■□□ 2.53
PDCD2-209ENST00000542896 TOX2Q96NM4 488 aa30.86■■■□□ 2.53
PDCD2-209ENST00000542896 ABHD16BQ9H3Z7 469 aa30.86■■■□□ 2.53
PDCD2-209ENST00000542896 HOMER2Q9NSB8 354 aa30.86■■■□□ 2.53
PDCD2-209ENST00000542896 TMEM232C9JQI7 657 aa30.85■■■□□ 2.53
PDCD2-209ENST00000542896 ZMYM1Q5SVZ6 1142 aa30.85■■■□□ 2.53
PDCD2-209ENST00000542896 ANKRD33Q7Z3H0 272 aa30.85■■■□□ 2.53
PDCD2-209ENST00000542896 OTUD7AQ8TE49 926 aaPredicted RBP30.85■■■□□ 2.53
PDCD2-209ENST00000542896 SEMA6BQ9H3T3 888 aa30.85■■■□□ 2.53
PDCD2-209ENST00000542896 SPC25Q9HBM1 224 aa30.85■■■□□ 2.53
PDCD2-209ENST00000542896 MYADML2A6NDP7 307 aa30.84■■■□□ 2.53
PDCD2-209ENST00000542896 C6orf222P0C671 652 aaPredicted RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms