RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 EIF4E1BA6NMX2 242 aaKnown RBP3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 ERVV-2B6SEH9 535 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 HYAL3O43820 417 aaPredicted RBP3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 PPP1R12BO60237 982 aaPredicted RBP3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 ALBP02768 609 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 COL6A1P12109 1028 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 NID1P14543 1247 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 POU3F3P20264 500 aaPredicted RBP3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 GRIK1P39086 918 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 AMPHP49418 695 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 IRAK1P51617 712 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 RIPPLY3P57055 190 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 GTF2IP78347 998 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 PRKCZQ05513 592 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 GRIK4Q16099 956 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 MCTP1Q6DN14 999 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 TPTE2Q6XPS3 522 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 NBPF5PQ86XG9 351 aaPredicted RBP3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 MAP4K3Q8IVH8 894 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 IFNL2Q8IZJ0 200 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 CACTIN-AS1Q8N1I8 211 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 USHBP1Q8N6Y0 703 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 GAS2L2Q8NHY3 880 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 EDAQ92838 391 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 BADQ92934 168 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 MDFIQ99750 246 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 RBSNQ9H1K0 784 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 SLC28A3Q9HAS3 691 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 FRRS1LQ9P0K9 344 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 MSRAQ9UJ68 235 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 OGDHLQ9ULD0 1010 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 TEX15Q9BXT5 2789 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 PLXNA3P51805 1871 aa3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 COL5A3P25940 1745 aaPredicted RBP3.13□□□□□ -1.91
TRAV1-1-201ENST00000542354 FBN3Q75N90 2809 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 PRRC2BQ5JSZ5 2229 aaKnown RBP3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 RIC1Q4ADV7 1423 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 CCL15-CCL14A0A0B4J2E2 113 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 TMEM221A6NGB7 291 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 TMEM229AB2RXF0 380 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 FAM229AH3BQW9 127 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 M0R296 226 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 M0R2N6 131 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 TAF4O00268 1085 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 PSMD14O00487 310 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 PROS1P07225 676 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 ITGB7P26010 798 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 CTGFP29279 349 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 AVPR2P30518 371 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 ABL2P42684 1182 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 FCGRTP55899 365 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 TBC1D8BQ0IIM8 1120 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 KIAA2012Q0VF49 1180 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 FAM50AQ14320 339 aaKnown RBP3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 RAB30Q15771 203 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 CCL15Q16663 113 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 EPHA10Q5JZY3 1008 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 FAM117BQ6P1L5 589 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 IGF2-ASQ6U949 168 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 C17orf99Q6UX52 265 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 FRMD5Q7Z6J6 570 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 KRTAP1-3Q8IUG1 177 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 SLC9A9Q8IVB4 645 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 FMR1NBQ8N0W7 255 aaPredicted RBP3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 KCNG4Q8TDN1 519 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 BHMTQ93088 406 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 PBX4Q9BYU1 374 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 ZCCHC17Q9NP64 241 aaKnown RBP3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 ALG13Q9NP73 1137 aaKnown RBP3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 ZNF358Q9NW07 568 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 ANGPTL2Q9UKU9 493 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 SLC6A14Q9UN76 642 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 TBC1D2BQ9UPU7 963 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 TRIOO75962 3097 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 SH3TC1Q8TE82 1336 aa3.12□□□□□ -1.91
TRAV1-1-201ENST00000542354 TECTAO75443 2155 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 CFAP46Q8IYW2 2715 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 ZZEF1O43149 2961 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 KALRNO60229 2985 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 KRTAP9-6A0A140TA67 174 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 FAM177BA6PVY3 158 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 YDJCA8MPS7 323 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 TCERG1O14776 1098 aaKnown RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 RAD21O60216 631 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 CYP19A1P11511 503 aaPredicted RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 SKIP12755 728 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 HOXC9P31274 260 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 FLT3LGP49771 235 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 GTF2A2P52657 109 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 ATXN1P54253 815 aaKnown RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 CABP4P57796 275 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 RING1Q06587 406 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 VAC14Q08AM6 782 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 IRF5Q13568 498 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 CCINQ13939 588 aa3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 SOWAHCQ53LP3 525 aaPredicted RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 HERC4Q5GLZ8 1057 aaPredicted RBP3.11□□□□□ -1.91
TRAV1-1-201ENST00000542354 KANK4Q5T7N3 995 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms