RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 DDR1Q08345 913 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 TBX2Q13207 712 aaPredicted RBP16.72■□□□□ 0.27
DDX55-209ENST00000542286 DHX8Q14562 1220 aaKnown RBP16.72■□□□□ 0.27
DDX55-209ENST00000542286 C4orf32Q8N8J7 132 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 WDR24Q96S15 920 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 VPS16Q9H269 839 aa16.72■□□□□ 0.27
DDX55-209ENST00000542286 COL24A1Q17RW2 1714 aa16.71■□□□□ 0.27
DDX55-209ENST00000542286 RNF225M0QZC1 329 aaPredicted RBP16.71■□□□□ 0.27
DDX55-209ENST00000542286 RBL2Q08999 1139 aa16.71■□□□□ 0.27
DDX55-209ENST00000542286 NR1I3Q14994 352 aa16.71■□□□□ 0.27
DDX55-209ENST00000542286 EYA3Q99504 573 aa16.71■□□□□ 0.27
DDX55-209ENST00000542286 PPP2R2CQ9Y2T4 447 aa16.71■□□□□ 0.27
DDX55-209ENST00000542286 LAMB1P07942 1786 aa16.71■□□□□ 0.27
DDX55-209ENST00000542286 CCDC194A0A1B0GVG4 234 aa16.71■□□□□ 0.26
DDX55-209ENST00000542286 KLRF2D3W0D1 207 aa16.71■□□□□ 0.26
DDX55-209ENST00000542286 PCP11498 1178 aaKnown RBP16.71■□□□□ 0.26
DDX55-209ENST00000542286 GTF2IP78347 998 aa16.71■□□□□ 0.26
DDX55-209ENST00000542286 CEP95Q96GE4 821 aa16.71■□□□□ 0.26
DDX55-209ENST00000542286 PCDHA4Q9UN74 947 aa16.71■□□□□ 0.26
DDX55-209ENST00000542286 LEMD3Q9Y2U8 911 aa16.71■□□□□ 0.26
DDX55-209ENST00000542286 DLEC1Q9Y238 1755 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 PSDA5PKW4 1024 aaPredicted RBP16.7■□□□□ 0.26
DDX55-209ENST00000542286 BAG3O95817 575 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 GRM4Q14833 912 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 KANK3Q6NY19 840 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 TAB2Q9NYJ8 693 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 URI1O94763 535 aaPredicted RBP16.7■□□□□ 0.26
DDX55-209ENST00000542286 TRIM37O94972 964 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 H2AFXP16104 143 aaPredicted RBP16.7■□□□□ 0.26
DDX55-209ENST00000542286 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 LRRC47Q8N1G4 583 aaKnown RBP16.7■□□□□ 0.26
DDX55-209ENST00000542286 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
DDX55-209ENST00000542286 TMEM260Q9NX78 707 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 FHOD1Q9Y613 1164 aa16.7■□□□□ 0.26
DDX55-209ENST00000542286 FLT1P17948 1338 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
DDX55-209ENST00000542286 USP17L5A8MUK1 530 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 STXBP3O00186 592 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 ABL1P00519 1130 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 SCNN1DP51172 638 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
DDX55-209ENST00000542286 LETM2Q2VYF4 491 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 IGSF22Q8N9C0 903 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 IQUBQ8NA54 791 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 TRIM34Q9BYJ4 488 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 GGA1Q9UJY5 639 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 AFF2P51816 1311 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
DDX55-209ENST00000542286 ETF1P62495 437 aaKnown RBP16.69■□□□□ 0.26
DDX55-209ENST00000542286 NAALADL2Q58DX5 795 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 SPATA1Q5VX52 437 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 HPS3Q969F9 1004 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 PIGSQ96S52 555 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 LZTFL1Q9NQ48 299 aa16.69■□□□□ 0.26
DDX55-209ENST00000542286 A0A1B0GTH6 734 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 NRDCO43847 1150 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 CASP14P31944 242 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 STAT6P42226 847 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 DOK7Q18PE1 504 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 JAKMIP3Q5VZ66 844 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 TRIML1Q8N9V2 468 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 TBC1D16Q8TBP0 767 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 GJA10Q969M2 543 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 BIN2Q9UBW5 565 aaPredicted RBP16.68■□□□□ 0.26
DDX55-209ENST00000542286 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 FXR1P51114 621 aaKnown RBP eCLIP16.68■□□□□ 0.26
DDX55-209ENST00000542286 NAPAP54920 295 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 RHBDL3P58872 404 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
DDX55-209ENST00000542286 RAD9BQ6WBX8 426 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 GPIHBP1Q8IV16 184 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 ELOA2Q8IYF1 753 aaPredicted RBP16.68■□□□□ 0.26
DDX55-209ENST00000542286 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.68■□□□□ 0.26
DDX55-209ENST00000542286 PCDHAC2Q9Y5I4 1007 aa16.68■□□□□ 0.26
DDX55-209ENST00000542286 SNED1Q8TER0 1413 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 NKRFO15226 690 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDX55-209ENST00000542286 ERCC5P28715 1186 aaPredicted RBP16.67■□□□□ 0.26
DDX55-209ENST00000542286 PRCPP42785 496 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 CLCN6P51797 869 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 GNG11P61952 73 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 M0R2N6 131 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 KRT31Q15323 416 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 AMOTL1Q8IY63 956 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 NELFBQ8WX92 580 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 COA7Q96BR5 231 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 GSDMAQ96QA5 445 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 KCND1Q9NSA2 647 aa16.67■□□□□ 0.26
DDX55-209ENST00000542286 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
DDX55-209ENST00000542286 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 PES1O00541 588 aaKnown RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 CCNT1O60563 726 aaKnown RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 RPN1P04843 607 aaKnown RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 PNMA6AP0CW24 399 aaPredicted RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 CDKAL1Q5VV42 579 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 CARD6Q9BX69 1037 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 TSPYL1Q9H0U9 437 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms