RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 STAT2P52630 851 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 FOSBP53539 338 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
FAM60A-206ENST00000539409 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 KCNH4Q9UQ05 1017 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 ZDHHC9Q9Y397 364 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 TOMM70O94826 608 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 SCG2P13521 617 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 SYDE2Q5VT97 1194 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 SHISA4Q96DD7 197 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 MTMR8Q96EF0 704 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 RRP36Q96EU6 259 aaKnown RBP13.21□□□□□ -0.29
FAM60A-206ENST00000539409 C8orf76Q96K31 380 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 PIGSQ96S52 555 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 VAT1LQ9HCJ6 419 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 MTMR6Q9Y217 621 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
FAM60A-206ENST00000539409 CXCL11O14625 94 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 PLA2G6O60733 806 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 BRD1O95696 1058 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 NUCB2P80303 420 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
FAM60A-206ENST00000539409 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
FAM60A-206ENST00000539409 RPAP3Q9H6T3 665 aaPredicted RBP13.21□□□□□ -0.29
FAM60A-206ENST00000539409 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 FEM1BQ9UK73 627 aa13.21□□□□□ -0.29
FAM60A-206ENST00000539409 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
FAM60A-206ENST00000539409 OTUD7BQ6GQQ9 843 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 FBXO18Q8NFZ0 1043 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
FAM60A-206ENST00000539409 TMOD4Q9NZQ9 345 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 PRR12Q9ULL5 1215 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 RLFQ13129 1914 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
FAM60A-206ENST00000539409 HUNKP57058 714 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.38e-10■■□□□ 13.8
FAM60A-206ENST00000539409 VPS54Q9P1Q0 977 aa13.2□□□□□ -0.3
FAM60A-206ENST00000539409 SEC63Q9UGP8 760 aaKnown RBP13.2□□□□□ -0.3
FAM60A-206ENST00000539409 H3BQV1 296 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 ZSCAN22P10073 491 aaPredicted RBP13.19□□□□□ -0.3
FAM60A-206ENST00000539409 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
FAM60A-206ENST00000539409 CDC37Q16543 378 aaPredicted RBP13.19□□□□□ -0.3
FAM60A-206ENST00000539409 IFFO2Q5TF58 517 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 WNK4Q96J92 1243 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 PNMA6FA0A0J9YX94 578 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 ZBTB5O15062 677 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
FAM60A-206ENST00000539409 MOGSQ13724 837 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 KRT40Q6A162 431 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 HEATR3Q7Z4Q2 680 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 SAPCD2Q86UD0 394 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
FAM60A-206ENST00000539409 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 SLF1Q9BQI6 1058 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
FAM60A-206ENST00000539409 FLOT1O75955 427 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 TRIM29Q14134 588 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 QRICH1Q2TAL8 776 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 FOXD4L5Q5VV16 416 aaPredicted RBP13.18□□□□□ -0.3
FAM60A-206ENST00000539409 TYW1BQ6NUM6 668 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 FOXD4L4Q8WXT5 416 aaPredicted RBP13.18□□□□□ -0.3
FAM60A-206ENST00000539409 STXBP3O00186 592 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 SNAP25P60880 206 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 FSTL1Q12841 308 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 SNAPC2Q13487 334 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
FAM60A-206ENST00000539409 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
FAM60A-206ENST00000539409 MMP1P03956 469 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 XBP1P17861 261 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 GADL1Q6ZQY3 521 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 PRPF38AQ8NAV1 312 aaKnown RBP13.17□□□□□ -0.3
FAM60A-206ENST00000539409 PHF20Q9BVI0 1012 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 SH3GLB2Q9NR46 395 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 hCG_1984214I3L0E3 225 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 F13A1P00488 732 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 ZBTB48P10074 688 aaPredicted RBP13.17□□□□□ -0.3
FAM60A-206ENST00000539409 SPRYD7Q5W111 196 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
FAM60A-206ENST00000539409 CATSPERGQ6ZRH7 1159 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 ZNF713Q8N859 430 aaPredicted RBP13.17□□□□□ -0.3
FAM60A-206ENST00000539409 TLL2Q9Y6L7 1015 aa13.17□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L15C9J2P7 530 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L13C9JLJ4 530 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L11C9JVI0 530 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L18D6R9N7 530 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L22D6RA61 530 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L17D6RBQ6 530 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L19D6RCP7 530 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L20D6RJB6 530 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 USP17L24Q0WX57 530 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms