RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 TMX2Q9Y320 296 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 PRUNE2Q8WUY3 3088 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 GREB1LQ9C091 1923 aaPredicted RBP11.13□□□□□ -0.63
VPS26B-207ENST00000532160 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 USP17L12C9JPN9 530 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 USP17L21D6R901 530 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 SGSM2O43147 1006 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 SEPT4O43236 478 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 STRNO43815 780 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 TMEM132BQ14DG7 1078 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 NCAPG2Q86XI2 1143 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 STK11IPQ8N1F8 1099 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 RUFY2Q8WXA3 655 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 MAML3Q96JK9 1138 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 ESYT1Q9BSJ8 1104 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 MROH8Q9H579 483 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 ATP8A2Q9NTI2 1148 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 ATP11BQ9Y2G3 1177 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 STXBP5LQ9Y2K9 1186 aa11.13□□□□□ -0.63
VPS26B-207ENST00000532160 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
VPS26B-207ENST00000532160 KBTBD13C9JR72 458 aa11.12□□□□□ -0.63
VPS26B-207ENST00000532160 WDR46O15213 610 aaKnown RBP11.12□□□□□ -0.63
VPS26B-207ENST00000532160 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
VPS26B-207ENST00000532160 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
VPS26B-207ENST00000532160 PTH1RQ03431 593 aa11.12□□□□□ -0.63
VPS26B-207ENST00000532160 FAM47AQ5JRC9 791 aa11.12□□□□□ -0.63
VPS26B-207ENST00000532160 SLC39A5Q6ZMH5 540 aa11.12□□□□□ -0.63
VPS26B-207ENST00000532160 IFNL3Q8IZI9 196 aa11.12□□□□□ -0.63
VPS26B-207ENST00000532160 ABRAQ8N0Z2 381 aa11.12□□□□□ -0.63
VPS26B-207ENST00000532160 LBHD1Q9BQE6 289 aaPredicted RBP11.12□□□□□ -0.63
VPS26B-207ENST00000532160 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
VPS26B-207ENST00000532160 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 PGK2P07205 417 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 FCER1AP12319 257 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 TDO2P48775 406 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 SNX17Q15036 470 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 LRRC41Q15345 812 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 TRIM60Q495X7 471 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 CASC1Q6TDU7 716 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 ARRDC4Q8NCT1 418 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 REPS2Q8NFH8 660 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 FERMT2Q96AC1 680 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 GUCD1Q96NT3 240 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS26B-207ENST00000532160 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
VPS26B-207ENST00000532160 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 ADAMTS5Q9UNA0 930 aa11.11□□□□□ -0.63
VPS26B-207ENST00000532160 RAD50Q92878 1312 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 SPTBN5Q9NRC6 3674 aaKnown RBP11.1□□□□□ -0.63
VPS26B-207ENST00000532160 MYH4Q9Y623 1939 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 MINDY4BA8MYZ0 360 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 VWA5AO00534 786 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 SLC25A27O95847 323 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 TAL1P17542 331 aaPredicted RBP11.1□□□□□ -0.63
VPS26B-207ENST00000532160 GNAT2P19087 354 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 ADCYAP1R1P41586 468 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 FAM83BQ5T0W9 1011 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 SH3RF1Q7Z6J0 888 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 LENG1Q96BZ8 264 aaPredicted RBP11.1□□□□□ -0.63
VPS26B-207ENST00000532160 FAM161BQ96MY7 647 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 MMP19Q99542 508 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 NAPBQ9H115 298 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 KANSL2Q9H9L4 492 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 PDLIM7Q9NR12 457 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 PRKAG2Q9UGJ0 569 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 PPP1R9AQ9ULJ8 1098 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
VPS26B-207ENST00000532160 MCM3APO60318 1980 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 RAD21O60216 631 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 SEC24BO95487 1268 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 FGAP02671 866 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 MFAP1P55081 439 aaKnown RBP11.09□□□□□ -0.63
VPS26B-207ENST00000532160 HAND2P61296 217 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 SHHQ15465 462 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 C8orf34Q49A92 452 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 C9orf50Q5SZB4 431 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 KIAA1211Q6ZU35 1233 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 RIOX2Q8IUF8 465 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 AMOTL1Q8IY63 956 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 BADQ92934 168 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 TRIM43Q96BQ3 446 aaPredicted RBP11.09□□□□□ -0.63
VPS26B-207ENST00000532160 NUP88Q99567 741 aaPredicted RBP11.09□□□□□ -0.63
VPS26B-207ENST00000532160 NACAP1Q9BZK3 213 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 LSG1Q9H089 658 aaKnown RBP11.09□□□□□ -0.63
VPS26B-207ENST00000532160 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
VPS26B-207ENST00000532160 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
VPS26B-207ENST00000532160 ZNF214Q9UL59 606 aaPredicted RBP11.09□□□□□ -0.63
VPS26B-207ENST00000532160 ROBO3Q96MS0 1386 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 PGK1P00558 417 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 RARBP10826 455 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 RASA1P20936 1047 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 ITGB8P26012 769 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 STAT3P40763 770 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms