RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 TRAF5O00463 557 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 CPLX1O14810 134 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 CELF2O95319 508 aaKnown RBP16.72■□□□□ 0.27
NR1H3-231ENST00000529540 PTPRAP18433 802 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 FSTL1Q12841 308 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 PRKG1Q13976 671 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 VGLL4Q14135 290 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 RTN1Q16799 776 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 LUZP1Q86V48 1076 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 FANCBQ8NB91 859 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 NUP133Q8WUM0 1156 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 ZKSCAN4Q969J2 545 aaPredicted RBP16.72■□□□□ 0.27
NR1H3-231ENST00000529540 FEZ1Q99689 392 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 LZTS2Q9BRK4 669 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
NR1H3-231ENST00000529540 GOLGA6L4A6NEF3 574 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 PPATQ06203 517 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 RESTQ13127 1097 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 GPATCH4Q5T3I0 446 aaKnown RBP16.72■□□□□ 0.27
NR1H3-231ENST00000529540 LDLRAD1Q5T700 205 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.72■□□□□ 0.27
NR1H3-231ENST00000529540 ERO1BQ86YB8 467 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 ZNF280CQ8ND82 737 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 DCAF4Q8WV16 495 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 LPAR1Q92633 364 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 SENP2Q9HC62 589 aa16.72■□□□□ 0.27
NR1H3-231ENST00000529540 C19orf81C9J6K1 198 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 PARP1P09874 1014 aaKnown RBP16.71■□□□□ 0.27
NR1H3-231ENST00000529540 JAG1P78504 1218 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 SARM1Q6SZW1 724 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 CCDC186Q7Z3E2 898 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 LRRC47Q8N1G4 583 aaKnown RBP16.71■□□□□ 0.27
NR1H3-231ENST00000529540 GMCL1Q96IK5 515 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 ARID3AQ99856 593 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 KIAA1683Q9H0B3 1180 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 HPS5Q9UPZ3 1129 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 SNCAIPQ9Y6H5 919 aa16.71■□□□□ 0.27
NR1H3-231ENST00000529540 SPDYE5A6NIY4 337 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 SCRN1Q12765 414 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 STK3Q13188 491 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 GRM4Q14833 912 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 DLK2Q6UY11 383 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 ZNF784Q8NCA9 323 aaPredicted RBP16.7■□□□□ 0.26
NR1H3-231ENST00000529540 VCPKMTQ9H867 229 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
NR1H3-231ENST00000529540 F5H6K3 240 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 PDHBP11177 359 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 SMARCA1P28370 1054 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 KLRC3Q07444 240 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 CAMK4Q16566 473 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-231ENST00000529540 CLEC10AQ8IUN9 316 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 ZSCAN16Q9H4T2 348 aaPredicted RBP16.69■□□□□ 0.26
NR1H3-231ENST00000529540 MYH4Q9Y623 1939 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 NEMFO60524 1076 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 SLC1A4P43007 532 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 BACE1P56817 501 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
NR1H3-231ENST00000529540 SLFN13Q68D06 897 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 FAM173BQ6P4H8 233 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 CKAP2LQ8IYA6 745 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 PGBD1Q96JS3 809 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 MYL10Q9BUA6 226 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 FZD1Q9UP38 647 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 PAXBP1Q9Y5B6 917 aa16.69■□□□□ 0.26
NR1H3-231ENST00000529540 TRPM7Q96QT4 1865 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 OTOFQ9HC10 1997 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 CTAGE5O15320 804 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 PPIL2Q13356 520 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 TRIM22Q8IYM9 498 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 SLC10A4Q96EP9 437 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 TRIM5Q9C035 493 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 AFG3L2Q9Y4W6 797 aa16.68■□□□□ 0.26
NR1H3-231ENST00000529540 PALM3A6NDB9 673 aaPredicted RBP16.67■□□□□ 0.26
NR1H3-231ENST00000529540 CXCL11O14625 94 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
NR1H3-231ENST00000529540 RAD21O60216 631 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 IFNAR1P17181 557 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 ECE1P42892 770 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 ZNF165P49910 485 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
NR1H3-231ENST00000529540 SPP2Q13103 211 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 ACER1Q8TDN7 264 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 C12orf42Q96LP6 360 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 ELP3Q9H9T3 547 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 TMOD4Q9NZQ9 345 aa16.67■□□□□ 0.26
NR1H3-231ENST00000529540 UBE2Q2LH0YL09 131 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 DTNBO60941 627 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 NR1I2O75469 434 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 NDUFB10O96000 172 aa16.66■□□□□ 0.26
NR1H3-231ENST00000529540 BMP3P12645 472 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms