RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ST20-MTHFSA0A0A6YYL1 179 aa7.2□□□□□ -1.26
SVIP-202ENST00000525670 LRIG2O94898 1065 aa7.2□□□□□ -1.26
SVIP-202ENST00000525670 GNA15P30679 374 aa7.2□□□□□ -1.26
SVIP-202ENST00000525670 PTPN11Q06124 597 aaPredicted RBP7.2□□□□□ -1.26
SVIP-202ENST00000525670 ANGEL2Q5VTE6 544 aaKnown RBP7.2□□□□□ -1.26
SVIP-202ENST00000525670 LRFN4Q6PJG9 635 aa7.2□□□□□ -1.26
SVIP-202ENST00000525670 CYFIP1Q7L576 1253 aa7.2□□□□□ -1.26
SVIP-202ENST00000525670 HDXQ7Z353 690 aa7.2□□□□□ -1.26
SVIP-202ENST00000525670 NGDNQ8NEJ9 315 aaKnown RBP7.2□□□□□ -1.26
SVIP-202ENST00000525670 ASB11Q8WXH4 323 aa7.2□□□□□ -1.26
SVIP-202ENST00000525670 TTF2Q9UNY4 1162 aaKnown RBP7.2□□□□□ -1.26
SVIP-202ENST00000525670 NPHP3Q7Z494 1330 aa7.2□□□□□ -1.26
SVIP-202ENST00000525670 TNS3Q68CZ2 1445 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 ZBTB7CA1YPR0 619 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 PRPF40AO75400 957 aaKnown RBP7.19□□□□□ -1.26
SVIP-202ENST00000525670 EOMESO95936 686 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 EIF4BP23588 611 aaKnown RBP7.19□□□□□ -1.26
SVIP-202ENST00000525670 FGD1P98174 961 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 SLC23A3Q6PIS1 610 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 ARMCX6Q7L4S7 300 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 KRT28Q7Z3Y7 464 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 SPACA3Q8IXA5 215 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 C8orf37Q96NL8 207 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 SNCAIPQ9Y6H5 919 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 CLSPNQ9HAW4 1339 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 PHRF1Q9P1Y6 1649 aaKnown RBP7.19□□□□□ -1.26
SVIP-202ENST00000525670 ALS2Q96Q42 1657 aa7.19□□□□□ -1.26
SVIP-202ENST00000525670 AKAP12Q02952 1782 aa7.18□□□□□ -1.26
SVIP-202ENST00000525670 TTBK2Q6IQ55 1244 aa7.18□□□□□ -1.26
SVIP-202ENST00000525670 PLPPR2Q96GM1 343 aa7.18□□□□□ -1.26
SVIP-202ENST00000525670 WNT10AQ9GZT5 417 aa7.18□□□□□ -1.26
SVIP-202ENST00000525670 AK5Q9Y6K8 562 aa7.18□□□□□ -1.26
SVIP-202ENST00000525670 COL22A1Q8NFW1 1626 aaPredicted RBP7.18□□□□□ -1.26
SVIP-202ENST00000525670 ACEP12821 1306 aa7.18□□□□□ -1.26
SVIP-202ENST00000525670 EVC2Q86UK5 1308 aa7.18□□□□□ -1.26
SVIP-202ENST00000525670 NRKQ7Z2Y5 1582 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 PIK3C2AO00443 1686 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 MYOM1P52179 1685 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 PLCH1Q4KWH8 1693 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 PRAMEF27A3QJZ7 478 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 GNAT3A8MTJ3 354 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 RPS26P62854 115 aaKnown RBP7.17□□□□□ -1.26
SVIP-202ENST00000525670 SLBPQ14493 270 aaKnown RBP eCLIP7.17□□□□□ -1.26
SVIP-202ENST00000525670 NKPD1Q17RQ9 610 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 LRRN4CLQ8ND94 238 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 GAL3ST3Q96A11 431 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 FOXQ1Q9C009 403 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 PRDM5Q9NQX1 630 aaPredicted RBP7.17□□□□□ -1.26
SVIP-202ENST00000525670 MAPK8IP1Q9UQF2 711 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 MARF1Q9Y4F3 1742 aaKnown RBP7.17□□□□□ -1.26
SVIP-202ENST00000525670 CRYBG1Q9Y4K1 1723 aa7.17□□□□□ -1.26
SVIP-202ENST00000525670 MON2Q7Z3U7 1717 aa7.16□□□□□ -1.26
SVIP-202ENST00000525670 SLITRK5O94991 958 aa7.16□□□□□ -1.26
SVIP-202ENST00000525670 HSPA5P11021 654 aaKnown RBP7.16□□□□□ -1.26
SVIP-202ENST00000525670 CAP2P40123 477 aa7.16□□□□□ -1.26
SVIP-202ENST00000525670 CLCN7P51798 805 aa7.16□□□□□ -1.26
SVIP-202ENST00000525670 CCDC85BQ15834 202 aaPredicted RBP7.16□□□□□ -1.26
SVIP-202ENST00000525670 LRRC59Q96AG4 307 aaKnown RBP7.16□□□□□ -1.26
SVIP-202ENST00000525670 FBRSQ9HAH7 460 aa7.16□□□□□ -1.26
SVIP-202ENST00000525670 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
SVIP-202ENST00000525670 SPATA31A3Q5VYP0 1347 aa7.16□□□□□ -1.26
SVIP-202ENST00000525670 ETF1P62495 437 aaKnown RBP7.15□□□□□ -1.26
SVIP-202ENST00000525670 IKZF1Q13422 519 aa7.15□□□□□ -1.26
SVIP-202ENST00000525670 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.15□□□□□ -1.26
SVIP-202ENST00000525670 HID1Q8IV36 788 aa7.15□□□□□ -1.26
SVIP-202ENST00000525670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.15□□□□□ -1.26
SVIP-202ENST00000525670 MFSD2AQ8NA29 543 aa7.15□□□□□ -1.26
SVIP-202ENST00000525670 TMEM40Q8WWA1 233 aa7.15□□□□□ -1.26
SVIP-202ENST00000525670 FAM168AQ92567 244 aa7.15□□□□□ -1.26
SVIP-202ENST00000525670 AFF2P51816 1311 aa7.15□□□□□ -1.26
SVIP-202ENST00000525670 A0A1W2PP64 1363 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 ANKRD33BA6NCL7 494 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 C8AP07357 584 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 LMNB1P20700 586 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 USP6P35125 1406 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 ZP2Q05996 745 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 FZD5Q13467 585 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 CNGB1Q14028 1251 aaPredicted RBP7.14□□□□□ -1.27
SVIP-202ENST00000525670 WIPI1Q5MNZ9 446 aaPredicted RBP7.14□□□□□ -1.27
SVIP-202ENST00000525670 SPATA31A6Q5VVP1 1343 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 TESK2Q96S53 571 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 DUSP9Q99956 384 aaKnown RBP7.14□□□□□ -1.27
SVIP-202ENST00000525670 PITPNM2Q9BZ72 1349 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 SLC12A5Q9H2X9 1139 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 CD163L1Q9NR16 1453 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 LMCD1Q9NZU5 365 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 RGS17Q9UGC6 210 aaPredicted RBP7.14□□□□□ -1.27
SVIP-202ENST00000525670 TACC3Q9Y6A5 838 aa7.14□□□□□ -1.27
SVIP-202ENST00000525670 SBNO1A3KN83 1393 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 POLR3AO14802 1390 aaPredicted RBP7.13□□□□□ -1.27
SVIP-202ENST00000525670 ARHGEF10O15013 1369 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 KTN1Q86UP2 1357 aaKnown RBP7.13□□□□□ -1.27
SVIP-202ENST00000525670 SBNO2Q9Y2G9 1366 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 GFRA2O00451 464 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 ZNF865P0CJ78 1059 aaPredicted RBP7.13□□□□□ -1.27
SVIP-202ENST00000525670 CDK8P49336 464 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 CHRNA2Q15822 529 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 NKG7Q16617 165 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 EAPPQ56P03 285 aaPredicted RBP7.13□□□□□ -1.27
SVIP-202ENST00000525670 SFRP5Q5T4F7 317 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms