RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CCDC121Q6ZUS5 278 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 SEC62Q99442 399 aaKnown RBP17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 ST7Q9NRC1 585 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 HESX1Q9UBX0 185 aa17.95■□□□□ 0.46
PCDHA3-201ENST00000522353 K7ENM7 598 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 EBAG9O00559 213 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 MMP10P09238 476 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 PROSER3Q2NL68 480 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 ADALQ6DHV7 355 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 CDHR1Q96JP9 859 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 RAD17O75943 681 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 ADD1P35611 737 aaKnown RBP17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 CYP2J2P51589 502 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 GRAPQ13588 217 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 UAP1Q16222 522 aaPredicted RBP17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 GRAPLQ8TC17 118 aaPredicted RBP17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 STAMQ92783 540 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 IMPACTQ9P2X3 320 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 SERPINA10Q9UK55 444 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 STAT1P42224 750 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 HDXQ7Z353 690 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 NBPF11Q86T75 865 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 TIGD1Q96MW7 591 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 DDX23Q9BUQ8 820 aaKnown RBP17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 ANAPC4Q9UJX5 808 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 BRINP3Q76B58 766 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 MASTLQ96GX5 879 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 ANO3Q9BYT9 981 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 BLZF1Q9H2G9 400 aa17.94■□□□□ 0.46
PCDHA3-201ENST00000522353 KDM5CP41229 1560 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 TMEM191BP0C7N4 346 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 ME3Q16798 604 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 ARHGAP44Q17R89 818 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 C8orf74Q6P047 294 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 EP400NLQ6ZTU2 488 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 EXOC8Q8IYI6 725 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 ABI1Q8IZP0 508 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 SLC17A8Q8NDX2 589 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 PIGBQ92521 554 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 SEC31BQ9NQW1 1179 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 C1orf112Q9NSG2 853 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 ARMCX3Q9UH62 379 aaPredicted RBP17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 SERTAD1Q9UHV2 236 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 UTP11Q9Y3A2 253 aaKnown RBP17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 MBD5Q9P267 1494 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 UBLCP1Q8WVY7 318 aaPredicted RBP17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 RPS6KC1Q96S38 1066 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 MED10Q9BTT4 135 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 ZEB2O60315 1214 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 GMNNO75496 209 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 ADORA1P30542 326 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 MNAT1P51948 309 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 METTL14Q9HCE5 456 aaKnown RBP17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 PI4KBQ9UBF8 816 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 USP17L3A6NCW0 530 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 USP17L4A6NCW7 530 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 LRRIQ4A6NIV6 560 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 RPS6KA4O75676 772 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 PPP2R3AQ06190 1150 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 AOC3Q16853 763 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 USP17L1Q7RTZ2 530 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 CMTR1Q8N1G2 835 aaKnown RBP17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 CCDC94Q9BW85 323 aaPredicted RBP17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 COA1Q9GZY4 146 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 PRKAG2Q9UGJ0 569 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 TSKSQ9UJT2 592 aa17.93■□□□□ 0.46
PCDHA3-201ENST00000522353 ITIH3Q06033 890 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 ERO1AQ96HE7 468 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 SAMD15Q9P1V8 674 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 FEZ2Q9UHY8 353 aaPredicted RBP17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 DBNLQ9UJU6 430 aaKnown RBP17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 RABGAP1Q9Y3P9 1069 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 GPKOWQ92917 476 aaPredicted RBP eCLIP17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 PIM2Q9P1W9 311 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 ERVK-7P63135 1459 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 CAPN9O14815 690 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 EVCP57679 992 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 SETDB1Q15047 1291 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 ZMYM1Q5SVZ6 1142 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 TAOK1Q7L7X3 1001 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 ASIC3Q9UHC3 531 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 SPATA31A3Q5VYP0 1347 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 hCG_1984214I3L0E3 225 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 PTH1RQ03431 593 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 CROCCP2Q86T23 111 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 ZNF713Q8N859 430 aaPredicted RBP17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 FAM76AQ8TAV0 307 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 MMS19Q96T76 1030 aa17.92■□□□□ 0.46
PCDHA3-201ENST00000522353 RETREG2Q8NC44 543 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 SLC7A3Q8WY07 619 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 BMP3P12645 472 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 LGSNQ5TDP6 509 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 ARMCX5Q6P1M9 558 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 ZSWIM6Q9HCJ5 1215 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 VPS18Q9P253 973 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 ABT1Q9ULW3 272 aaKnown RBP17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 ERCC3P19447 782 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 KIF11P52732 1056 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 ARHGAP6O43182 974 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms