RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 STX8Q9UNK0 236 aa20.19■□□□□ 0.82
SQLE-205ENST00000521232 NMT2O60551 498 aa20.18■□□□□ 0.82
SQLE-205ENST00000521232 ZBED4O75132 1171 aa20.18■□□□□ 0.82
SQLE-205ENST00000521232 KIFC2Q96AC6 838 aa20.18■□□□□ 0.82
SQLE-205ENST00000521232 MAML3Q96JK9 1138 aa20.18■□□□□ 0.82
SQLE-205ENST00000521232 MMP19Q99542 508 aa20.18■□□□□ 0.82
SQLE-205ENST00000521232 DIAPH3Q9NSV4 1193 aa20.18■□□□□ 0.82
SQLE-205ENST00000521232 TCP11L1Q9NUJ3 509 aa20.18■□□□□ 0.82
SQLE-205ENST00000521232 PLA2G6O60733 806 aa20.17■□□□□ 0.82
SQLE-205ENST00000521232 FDX1P10109 184 aa20.17■□□□□ 0.82
SQLE-205ENST00000521232 PCP11498 1178 aaKnown RBP20.17■□□□□ 0.82
SQLE-205ENST00000521232 KCTD2Q14681 263 aa20.17■□□□□ 0.82
SQLE-205ENST00000521232 TRPV1Q8NER1 839 aa20.17■□□□□ 0.82
SQLE-205ENST00000521232 DIS3Q9Y2L1 958 aaKnown RBP20.17■□□□□ 0.82
SQLE-205ENST00000521232 RIPK3Q9Y572 518 aa20.17■□□□□ 0.82
SQLE-205ENST00000521232 NR2E3Q9Y5X4 410 aa20.17■□□□□ 0.82
SQLE-205ENST00000521232 DNAH12Q6ZR08 3092 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 TMEM232C9JQI7 657 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 MSCO60682 206 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 CYBAP13498 195 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 MCCP23508 829 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 SLC1A4P43007 532 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 OAZ1P54368 228 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 HAND2P61296 217 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 ZNF792Q3KQV3 632 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 AKNAD1Q5T1N1 836 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 SNRNP48Q6IEG0 339 aaKnown RBP20.16■□□□□ 0.82
SQLE-205ENST00000521232 CHURC1Q8WUH1 139 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 STAG1Q8WVM7 1258 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 C11orf49Q9H6J7 331 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 TOMM22Q9NS69 142 aa20.16■□□□□ 0.82
SQLE-205ENST00000521232 DDX20Q9UHI6 824 aaKnown RBP20.16■□□□□ 0.82
SQLE-205ENST00000521232 RANBP2P49792 3224 aaKnown RBP20.16■□□□□ 0.82
SQLE-205ENST00000521232 CNGA1P29973 690 aa20.15■□□□□ 0.82
SQLE-205ENST00000521232 STAT2P52630 851 aa20.15■□□□□ 0.82
SQLE-205ENST00000521232 RRP12Q5JTH9 1297 aaKnown RBP20.15■□□□□ 0.82
SQLE-205ENST00000521232 RCSD1Q6JBY9 416 aa20.15■□□□□ 0.82
SQLE-205ENST00000521232 MFSD6Q6ZSS7 791 aa20.15■□□□□ 0.82
SQLE-205ENST00000521232 FAM160B2Q86V87 743 aa20.15■□□□□ 0.82
SQLE-205ENST00000521232 CPXCR1Q8N123 301 aa20.15■□□□□ 0.82
SQLE-205ENST00000521232 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
SQLE-205ENST00000521232 ALPK3Q96L96 1907 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 PLXNA1Q9UIW2 1896 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 ZNF213O14771 459 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 EVI5O60447 810 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 PGK2P07205 417 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 COL6A1P12109 1028 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 GSPT1P15170 499 aaKnown RBP20.14■□□□□ 0.81
SQLE-205ENST00000521232 TTC22Q5TAA0 569 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.14■□□□□ 0.811e-6■■■□□ 16.2
SQLE-205ENST00000521232 DSCC1Q9BVC3 393 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 RNF41Q9H4P4 317 aaPredicted RBP20.14■□□□□ 0.81
SQLE-205ENST00000521232 RAVER2Q9HCJ3 691 aaKnown RBP20.14■□□□□ 0.81
SQLE-205ENST00000521232 SMCHD1A6NHR9 2005 aa20.14■□□□□ 0.81
SQLE-205ENST00000521232 FRMPD3Q5JV73 1810 aa20.13■□□□□ 0.81
SQLE-205ENST00000521232 HABP4Q5JVS0 413 aaKnown RBP20.13■□□□□ 0.81
SQLE-205ENST00000521232 TBC1D10CQ8IV04 446 aa20.13■□□□□ 0.81
SQLE-205ENST00000521232 TTC14Q96N46 770 aa20.13■□□□□ 0.81
SQLE-205ENST00000521232 TMEM47Q9BQJ4 181 aa20.13■□□□□ 0.81
SQLE-205ENST00000521232 TINF2Q9BSI4 451 aa20.13■□□□□ 0.81
SQLE-205ENST00000521232 PFASO15067 1338 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 DNAJC25-GNG10A0A024R161 153 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 SEPT4O43236 478 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 SLC34A2O95436 690 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 TOP1P11387 765 aaKnown RBP20.12■□□□□ 0.81
SQLE-205ENST00000521232 NT5C2P49902 561 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 PRAMEF19Q5SWL8 479 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 KCTD1Q719H9 257 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 CHST13Q8NET6 341 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 DCAF4Q8WV16 495 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 FBXO40Q9UH90 709 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 NRBP1Q9UHY1 535 aa20.12■□□□□ 0.81
SQLE-205ENST00000521232 COLQQ9Y215 455 aaPredicted RBP20.12■□□□□ 0.81
SQLE-205ENST00000521232 SLC4A3P48751 1232 aa20.11■□□□□ 0.81
SQLE-205ENST00000521232 MSL3Q8N5Y2 521 aaKnown RBP20.11■□□□□ 0.81
SQLE-205ENST00000521232 CHMP4CQ96CF2 233 aa20.11■□□□□ 0.81
SQLE-205ENST00000521232 DDX11Q96FC9 970 aa20.11■□□□□ 0.81
SQLE-205ENST00000521232 ISY1Q9ULR0 285 aaKnown RBP20.11■□□□□ 0.81
SQLE-205ENST00000521232 ZNF536O15090 1300 aa20.1■□□□□ 0.81
SQLE-205ENST00000521232 IKQ13123 557 aaPredicted RBP20.1■□□□□ 0.81
SQLE-205ENST00000521232 RASGRP2Q7LDG7 609 aa20.1■□□□□ 0.81
SQLE-205ENST00000521232 ESR2Q92731 530 aa20.1■□□□□ 0.81
SQLE-205ENST00000521232 IL25Q9H293 177 aa20.1■□□□□ 0.81
SQLE-205ENST00000521232 CTNNA3Q9UI47 895 aa20.1■□□□□ 0.81
SQLE-205ENST00000521232 PRR12Q9ULL5 1215 aa20.1■□□□□ 0.81
SQLE-205ENST00000521232 TRIOBPQ9H2D6 2365 aa20.1■□□□□ 0.81
SQLE-205ENST00000521232 LAMA4Q16363 1823 aa20.09■□□□□ 0.81
SQLE-205ENST00000521232 MAMDC4Q6UXC1 1216 aa20.09■□□□□ 0.81
SQLE-205ENST00000521232 BTNL9Q6UXG8 535 aa20.09■□□□□ 0.81
SQLE-205ENST00000521232 ANKRD35Q8N283 1001 aa20.09■□□□□ 0.81
SQLE-205ENST00000521232 NEDD4P46934 1319 aa20.08■□□□□ 0.81
SQLE-205ENST00000521232 DNM1LO00429 736 aa20.08■□□□□ 0.81
SQLE-205ENST00000521232 IMMTQ16891 758 aaKnown RBP20.08■□□□□ 0.81
SQLE-205ENST00000521232 TKFCQ3LXA3 575 aa20.08■□□□□ 0.81
SQLE-205ENST00000521232 CHRDL2Q6WN34 429 aa20.08■□□□□ 0.81
SQLE-205ENST00000521232 ZNF467Q7Z7K2 595 aaPredicted RBP20.08■□□□□ 0.81
SQLE-205ENST00000521232 DGKHQ86XP1 1220 aa20.08■□□□□ 0.81
SQLE-205ENST00000521232 ARRDC4Q8NCT1 418 aa20.08■□□□□ 0.81
SQLE-205ENST00000521232 AGBL1Q96MI9 1066 aa20.08■□□□□ 0.81
SQLE-205ENST00000521232 MTMR7Q9Y216 660 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms