RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	RAD18	Q9NS91	495 aa		4.66	□□□□□ -1.66
SREK1-208	ENST00000520580	SAMD15	Q9P1V8	674 aa		4.66	□□□□□ -1.66
SREK1-208	ENST00000520580	DLL1	O00548	723 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	SHOX	O15266	292 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	AOC2	O75106	756 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	FLT3	P36888	993 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	BAG6	P46379	1132 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	RING1	Q06587	406 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	GRB10	Q13322	594 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	KIF4B	Q2VIQ3	1234 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	HSP90AB4P	Q58FF6	505 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	PRAMEF13	Q5VWM6	474 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	UBE2R2	Q712K3	238 aa	Predicted RBP	4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	PCDHGC5	Q9Y5F6	944 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	PCDHA8	Q9Y5H6	950 aa		4.65	□□□□□ -1.66
SREK1-208	ENST00000520580	LOC100289279	A0A1B0GTE1	492 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	NEURL1B	A8MQ27	555 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	AXIN1	O15169	862 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	EFCAB14	O75071	495 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	NPTXR	O95502	500 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	CAPNS1	P04632	268 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	SNRPB2	P08579	225 aa	Known RBP	4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	SLFN14	P0C7P3	912 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	NTF4	P34130	210 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	ECI1	P42126	302 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	VPS72	Q15906	364 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	NOL9	Q5SY16	702 aa	Known RBP	4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	KCNT2	Q6UVM3	1135 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	TRIM59	Q8IWR1	403 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	E2F7	Q96AV8	911 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	MRGPRX3	Q96LB0	322 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	AVEN	Q9NQS1	362 aa	Predicted RBP	4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	WHRN	Q9P202	907 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	EMC9	Q9Y3B6	208 aa		4.65	□□□□□ -1.67
SREK1-208	ENST00000520580	RFPL1	O75677	317 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	GLRX3	O76003	335 aa	Known RBP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	SNUPN	O95149	360 aa	Known RBP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	BPI	P17213	487 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	FCHSD1	Q86WN1	690 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	HID1	Q8IV36	788 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	MRPL41	Q8IXM3	137 aa	Known RBP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	CBARP	Q8N350	705 aa	Predicted RBP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	MAF1	Q9H063	256 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	FRRS1L	Q9P0K9	344 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	PPP1R9A	Q9ULJ8	1098 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	APOBEC2	Q9Y235	224 aa	Known RBP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	COQ6	Q9Y2Z9	468 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	NPHP1	O15259	732 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	NRDC	O43847	1150 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	VAMP4	O75379	141 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	FKBP9	O95302	570 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	AVP	P01185	164 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	GFRA1	P56159	465 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	GUCY1A3	Q02108	690 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	PICALM	Q13492	652 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	ZRSR2	Q15696	482 aa	Known RBP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	GRIK5	Q16478	980 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	ATP13A4	Q4VNC1	1196 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	COBLL1	Q53SF7	1204 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	IFFO2	Q5TF58	517 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	GTF2IRD2B	Q6EKJ0	949 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	C8orf86	Q6ZUL3	223 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	FKBP9P1	Q75LS8	142 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	MTDH	Q86UE4	582 aa	Known RBP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	GTF2IRD2	Q86UP8	949 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	GALNT11	Q8NCW6	608 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	PARD3B	Q8TEW8	1205 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	KCTD13	Q8WZ19	329 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	GP6	Q9HCN6	339 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	ANLN	Q9NQW6	1124 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	SPTLC3	Q9NUV7	552 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	BSDC1	Q9NW68	430 aa	Predicted RBP	4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	USP25	Q9UHP3	1055 aa		4.64	□□□□□ -1.67
SREK1-208	ENST00000520580	ST8SIA5	O15466	376 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ZEB2	O60315	1214 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ADAM11	O75078	769 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ADH6	P28332	368 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	TRAPPC10	P48553	1259 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ERVK-24	P63145	666 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	AUH	Q13825	339 aa	Known RBP	4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ODF1	Q14990	250 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	DPY19L1	Q2PZI1	675 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	GRAMD1B	Q3KR37	738 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	SLC6A19	Q695T7	634 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	POMZP3	Q6PJE2	187 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	PNMA8A	Q86V59	439 aa	Predicted RBP	4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	CMIP	Q8IY22	773 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	IGSF22	Q8N9C0	903 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	SMARCC1	Q92922	1105 aa	Predicted RBP	4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	EMC7	Q9NPA0	242 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	THG1L	Q9NWX6	298 aa	Known RBP	4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms