RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 RNF4P78317 190 aa7.93□□□□□ -1.14
LINC00535-204ENST00000520513 FBLN7Q53RD9 439 aa7.93□□□□□ -1.14
LINC00535-204ENST00000520513 ENOX1Q8TC92 643 aaKnown RBP7.93□□□□□ -1.14
LINC00535-204ENST00000520513 SLC6A18Q96N87 628 aa7.93□□□□□ -1.14
LINC00535-204ENST00000520513 FAM86C2PA6NEL3 165 aa7.92□□□□□ -1.14
LINC00535-204ENST00000520513 CLEC3AO75596 197 aa7.92□□□□□ -1.14
LINC00535-204ENST00000520513 RPL10P27635 214 aaKnown RBP7.92□□□□□ -1.14
LINC00535-204ENST00000520513 SOX9P48436 509 aa7.92□□□□□ -1.14
LINC00535-204ENST00000520513 CHMP4BP1P59074 171 aa7.92□□□□□ -1.14
LINC00535-204ENST00000520513 ANKLE2Q86XL3 938 aa7.92□□□□□ -1.14
LINC00535-204ENST00000520513 ZSCAN18Q8TBC5 510 aaPredicted RBP7.92□□□□□ -1.14
LINC00535-204ENST00000520513 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.92□□□□□ -1.14
LINC00535-204ENST00000520513 ZNRF3Q9ULT6 936 aa7.92□□□□□ -1.14
LINC00535-204ENST00000520513 YBX2Q9Y2T7 364 aaKnown RBP7.92□□□□□ -1.14
LINC00535-204ENST00000520513 MYOCOSA0A1B0GUC4 107 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 C9IYK1 514 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 ETV2O00321 342 aaPredicted RBP7.91□□□□□ -1.14
LINC00535-204ENST00000520513 USP2O75604 605 aaPredicted RBP7.91□□□□□ -1.14
LINC00535-204ENST00000520513 CTSKP43235 329 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 DUSP4Q13115 394 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 RNF111Q6ZNA4 994 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 LCNL1Q6ZST4 164 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 MCF2L2Q86YR7 1114 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 ZNF655Q8N720 491 aaPredicted RBP7.91□□□□□ -1.14
LINC00535-204ENST00000520513 SLC26A8Q96RN1 970 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 PPP1R1BQ9UD71 204 aaPredicted RBP7.91□□□□□ -1.14
LINC00535-204ENST00000520513 TCFL5Q9UL49 500 aa7.91□□□□□ -1.14
LINC00535-204ENST00000520513 SHOXO15266 292 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 SIGLEC6O43699 453 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 FKTNO75072 461 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 MED14OSP0DP75 135 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 CCNFP41002 786 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 CHRNEQ04844 493 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 SOGA3Q5TF21 947 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 WAPLQ7Z5K2 1190 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 IRF2BP1Q8IU81 584 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 LINC00116Q8NCU8 138 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 INTS4Q96HW7 963 aaKnown RBP7.9□□□□□ -1.14
LINC00535-204ENST00000520513 HHIPL1Q96JK4 782 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 HIRIP3Q9BW71 556 aaPredicted RBP7.9□□□□□ -1.14
LINC00535-204ENST00000520513 MCOLN1Q9GZU1 580 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 ASCC2Q9H1I8 757 aaPredicted RBP7.9□□□□□ -1.14
LINC00535-204ENST00000520513 SLC6A17Q9H1V8 727 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 CWC22Q9HCG8 908 aaKnown RBP7.9□□□□□ -1.14
LINC00535-204ENST00000520513 CD320Q9NPF0 282 aa7.9□□□□□ -1.14
LINC00535-204ENST00000520513 SYPP08247 313 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 TMEM253P0C7T8 217 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 GLDCP23378 1020 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 KIR3DS1Q14943 382 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 ZYXQ15942 572 aaKnown RBP7.89□□□□□ -1.15
LINC00535-204ENST00000520513 RUFY4Q6ZNE9 571 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 NLRX1Q86UT6 975 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 PPFIBP1Q86W92 1011 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 SPPL2CQ8IUH8 684 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 LRRC56Q8IYG6 542 aaPredicted RBP7.89□□□□□ -1.15
LINC00535-204ENST00000520513 ANKS4BQ8N8V4 417 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 MAP6Q96JE9 813 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 GFOD1Q9NXC2 390 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 GPR160Q9UJ42 338 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 EFR3BQ9Y2G0 817 aa7.89□□□□□ -1.15
LINC00535-204ENST00000520513 MEIS1O00470 390 aa7.88□□□□□ -1.15
LINC00535-204ENST00000520513 STK10O94804 968 aaKnown RBP7.88□□□□□ -1.15
LINC00535-204ENST00000520513 NASPP49321 788 aaPredicted RBP7.88□□□□□ -1.15
LINC00535-204ENST00000520513 LRRFIP1Q32MZ4 808 aaKnown RBP7.88□□□□□ -1.15
LINC00535-204ENST00000520513 ATG14Q6ZNE5 492 aa7.88□□□□□ -1.15
LINC00535-204ENST00000520513 SIRT2Q8IXJ6 389 aa7.88□□□□□ -1.15
LINC00535-204ENST00000520513 PLCD4Q9BRC7 762 aa7.88□□□□□ -1.15
LINC00535-204ENST00000520513 CHST7Q9NS84 486 aa7.88□□□□□ -1.15
LINC00535-204ENST00000520513 GINM1Q9NU53 330 aa7.88□□□□□ -1.15
LINC00535-204ENST00000520513 PPT2Q9UMR5 302 aa7.88□□□□□ -1.15
LINC00535-204ENST00000520513 NPIPB6E9PJ23 425 aa7.87□□□□□ -1.15
LINC00535-204ENST00000520513 SSBP05455 408 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC00535-204ENST00000520513 GTF2F1P35269 517 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC00535-204ENST00000520513 RBL2Q08999 1139 aa7.87□□□□□ -1.15
LINC00535-204ENST00000520513 AUHQ13825 339 aaKnown RBP7.87□□□□□ -1.15
LINC00535-204ENST00000520513 SNX17Q15036 470 aa7.87□□□□□ -1.15
LINC00535-204ENST00000520513 TDRD10Q5VZ19 366 aaKnown RBP7.87□□□□□ -1.15
LINC00535-204ENST00000520513 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
LINC00535-204ENST00000520513 SIAH1Q8IUQ4 282 aa7.87□□□□□ -1.15
LINC00535-204ENST00000520513 MKRN2Q9H000 416 aaKnown RBP7.87□□□□□ -1.15
LINC00535-204ENST00000520513 TCAF2A6NFQ2 919 aa7.86□□□□□ -1.15
LINC00535-204ENST00000520513 IMPDH2P12268 514 aa7.86□□□□□ -1.15
LINC00535-204ENST00000520513 SDHBP21912 280 aa7.86□□□□□ -1.15
LINC00535-204ENST00000520513 PCBP3P57721 371 aaKnown RBP7.86□□□□□ -1.15
LINC00535-204ENST00000520513 KRTAP4-7Q9BYR0 210 aa7.86□□□□□ -1.15
LINC00535-204ENST00000520513 GCM1Q9NP62 436 aa7.86□□□□□ -1.15
LINC00535-204ENST00000520513 SUCOQ9UBS9 1254 aaKnown RBP7.86□□□□□ -1.15
LINC00535-204ENST00000520513 ZMYM5Q9UJ78 669 aa7.86□□□□□ -1.15
LINC00535-204ENST00000520513 SMG5Q9UPR3 1016 aaKnown RBP7.86□□□□□ -1.15
LINC00535-204ENST00000520513 NRDCO43847 1150 aa7.85□□□□□ -1.15
LINC00535-204ENST00000520513 KCNA10Q16322 511 aa7.85□□□□□ -1.15
LINC00535-204ENST00000520513 NBPF6Q5VWK0 638 aa7.85□□□□□ -1.15
LINC00535-204ENST00000520513 INTS3Q68E01 1043 aaKnown RBP7.85□□□□□ -1.15
LINC00535-204ENST00000520513 CRTC3Q6UUV7 619 aa7.85□□□□□ -1.15
LINC00535-204ENST00000520513 KCNN1Q92952 543 aa7.85□□□□□ -1.15
LINC00535-204ENST00000520513 NBPF4Q96M43 638 aa7.85□□□□□ -1.15
LINC00535-204ENST00000520513 SGPP1Q9BX95 441 aa7.85□□□□□ -1.15
LINC00535-204ENST00000520513 SRRTQ9BXP5 876 aaKnown RBP7.85□□□□□ -1.15
LINC00535-204ENST00000520513 ZNF552Q9H707 407 aaPredicted RBP7.85□□□□□ -1.15
LINC00535-204ENST00000520513 SHROOM4Q9ULL8 1493 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms