RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 PNMA6EA0A0J9YXQ4 647 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 C6orf229H3BNL8 230 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 CENPBP07199 599 aaPredicted RBP3.42□□□□□ -1.86
MCF2-208ENST00000519895 FDX1P10109 184 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 OSBPP22059 807 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 PDE4AP27815 886 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 KCNC4Q03721 635 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 LRRC26Q2I0M4 334 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 LRRC24Q50LG9 513 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 SH3D19Q5HYK7 790 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 LBX2Q6XYB7 198 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 ZNF605Q86T29 641 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 FBXL16Q8N461 479 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 EVI5LQ96CN4 794 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 C12orf42Q96LP6 360 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 LARP6Q9BRS8 491 aaKnown RBP3.42□□□□□ -1.86
MCF2-208ENST00000519895 HCFC2Q9Y5Z7 792 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 ATAD5Q96QE3 1844 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 TCRBV5S4A2TA0A5A2 114 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 CXCL11O14625 94 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 LDHBP07195 334 aaKnown RBP3.42□□□□□ -1.86
MCF2-208ENST00000519895 COPB2P35606 906 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 RCAN1P53805 252 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 TFCP2Q12800 502 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 NSUN4Q96CB9 384 aaKnown RBP3.42□□□□□ -1.86
MCF2-208ENST00000519895 WDR18Q9BV38 432 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 TCP11L1Q9NUJ3 509 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 TMOD2Q9NZR1 351 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 HMG20BQ9P0W2 317 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 KCNH4Q9UQ05 1017 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 MYH1P12882 1939 aa3.42□□□□□ -1.86
MCF2-208ENST00000519895 MKI67P46013 3256 aaKnown RBP3.42□□□□□ -1.86
MCF2-208ENST00000519895 INHAP05111 366 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 HOXB1P14653 301 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 CRKP46108 304 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 LAPTM4AQ15012 233 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 DLGAP5Q15398 846 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 APOBEC3HQ6NTF7 200 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 KBTBD3Q8NAB2 608 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 KCNB2Q92953 911 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 CCDC17Q96LX7 622 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 BCL2L13Q9BXK5 485 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 PUS3Q9BZE2 481 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 ZNF287Q9HBT7 754 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 ZSWIM6Q9HCJ5 1215 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 ZNF70Q9UC06 446 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 TECTAO75443 2155 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 PTPN13Q12923 2485 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 HTTP42858 3142 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 IRF6O14896 467 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 SURF6O75683 361 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 ADRA1BP35368 520 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 ADD2P35612 726 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 VCPP55072 806 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 RHBDL3P58872 404 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 IRX5P78411 483 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 SNX17Q15036 470 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 TSGA10IPQ3SY00 556 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 TTC39AQ5SRH9 613 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 ZNF467Q7Z7K2 595 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 MICALL2Q8IY33 904 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 CERS5Q8N5B7 392 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 PI4K2BQ8TCG2 481 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 MAP3K14Q99558 947 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 ZNF341Q9BYN7 854 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 PBX4Q9BYU1 374 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 UBE2ZQ9H832 354 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 DBNLQ9UJU6 430 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 NID2Q14112 1375 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 PTPRFP10586 1907 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 CARNS1A5YM72 827 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 SPDYE16A6NNV3 312 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 G3V3G9 751 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 UBE2Q2LH0YL09 131 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 CTNND1O60716 968 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 IFIT2P09913 472 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 ELAVL4P26378 380 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 PPATQ06203 517 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 PPIL2Q13356 520 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 RASGRF1Q13972 1273 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 MFSD14BQ5SR56 506 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 ZMYM1Q5SVZ6 1142 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 TATDN1Q6P1N9 297 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 DHX37Q8IY37 1157 aaKnown RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 NEK9Q8TD19 979 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 PANK1Q8TE04 598 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 APPBP2Q92624 585 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 EAF2Q96CJ1 260 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 ASIC4Q96FT7 647 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 PCMTD1Q96MG8 357 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 TEPSINQ96N21 525 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 DSCC1Q9BVC3 393 aa3.41□□□□□ -1.86
MCF2-208ENST00000519895 ARPP21Q9UBL0 812 aaPredicted RBP3.41□□□□□ -1.86
MCF2-208ENST00000519895 PARP14Q460N5 1801 aa3.4□□□□□ -1.86
MCF2-208ENST00000519895 C19orf81C9J6K1 198 aa3.4□□□□□ -1.86
MCF2-208ENST00000519895 WNT10BO00744 389 aa3.4□□□□□ -1.86
MCF2-208ENST00000519895 ORC4O43929 436 aa3.4□□□□□ -1.86
MCF2-208ENST00000519895 HOXC6P09630 235 aa3.4□□□□□ -1.86
MCF2-208ENST00000519895 SMARCA1P28370 1054 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms