RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	BTN2A2	Q8WVV5	523 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	EXOC2	Q96KP1	924 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	MRGPRX3	Q96LB0	322 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FEZ1	Q99689	392 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DHRS4	Q9BTZ2	278 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	LRRC4C	Q9HCJ2	640 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CHST7	Q9NS84	486 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SF3B6	Q9Y3B4	125 aa	Known RBP	4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CD2AP	Q9Y5K6	639 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CAPN6	Q9Y6Q1	641 aa		4.51	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	TRBV23-1	A0A0A0MS06	115 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	WDR64	B1ANS9	1081 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	IGF2BP3	O00425	579 aa	Known RBP eCLIP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GDF11	O95390	407 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ITGB2	P05107	769 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ZNF865	P0CJ78	1059 aa	Predicted RBP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PABPC1	P11940	636 aa	Known RBP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ITIH2	P19823	946 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	KCNJ6	P48051	423 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	KCNMA1	Q12791	1236 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DOC2B	Q14184	412 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CBX2	Q14781	532 aa	Predicted RBP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SF1	Q15637	639 aa	Known RBP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DPY19L1	Q2PZI1	675 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PLA2G4E	Q3MJ16	856 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	RNF187	Q5TA31	235 aa	Predicted RBP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CDKAL1	Q5VV42	579 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GTF2IRD2B	Q6EKJ0	949 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GPAT2	Q6NUI2	795 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	NSMF	Q6X4W1	530 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GTF2IRD2	Q86UP8	949 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SCUBE1	Q8IWY4	988 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PIWIL2	Q8TC59	973 aa	Known RBP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DBNDD2	Q9BQY9	259 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	IER2	Q9BTL4	223 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	OSBPL1A	Q9BXW6	950 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ATG3	Q9NT62	314 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PRR13	Q9NZ81	148 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	MRPS23	Q9Y3D9	190 aa	Known RBP	4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784		U3KQE9	123 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DCAF1	Q9Y4B6	1507 aa		4.5	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CCDC163	A0A0D9SF12	145 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784		H0Y8X5	98 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PPM1G	O15355	546 aa	Predicted RBP	4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FGFR1	P11362	822 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GSK3A	P49840	483 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	TAF7L	Q5H9L4	462 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CWF19L1	Q69YN2	538 aa	Known RBP	4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	C22orf34	Q6ZV56	151 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FILIP1	Q7Z7B0	1213 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SYNPO	Q8N3V7	929 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	TMEM151A	Q8N4L1	468 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SHKBP1	Q8TBC3	707 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	KISS1R	Q969F8	398 aa	Predicted RBP	4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	OSBP2	Q969R2	916 aa		4.49	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	BLACE	A4D250	179 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	WASH4P	A8MWX3	477 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DLX3	O60479	287 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	RAPGEF3	O95398	923 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	IGLV1-40	P01703	118 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CAPNS1	P04632	268 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SNRPB2	P08579	225 aa	Known RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	HSP90B1	P14625	803 aa	Known RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	FST	P19883	344 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ECI1	P42126	302 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CTSK	P43235	329 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	OXCT1	P55809	520 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	SUMO1	P63165	101 aa	Known RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	AMPD2	Q01433	879 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GRB10	Q13322	594 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DALRD3	Q5D0E6	543 aa	Known RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CRTC3	Q6UUV7	619 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DHX37	Q8IY37	1157 aa	Known RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ENOX1	Q8TC92	643 aa	Known RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	METTL22	Q9BUU2	404 aa	Predicted RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	HDAC8	Q9BY41	377 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GPR62	Q9BZJ7	368 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DUSP15	Q9H1R2	295 aa	Predicted RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	NKX2-4	Q9H2Z4	354 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	NCOA5	Q9HCD5	579 aa	Known RBP	4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	IFT57	Q9NWB7	429 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	ZSWIM5	Q9P217	1185 aa		4.48	□□□□□ -1.69
CALCOCO2-216	ENST00000509784		H3BS24	57 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	STXBP3	O00186	592 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DNAJC6	O75061	913 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GSN	P06396	782 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	CD3E	P07766	207 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	HOXC12	P31275	282 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	GFRA1	P56159	465 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	POU4F1	Q01851	419 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.47	□□□□□ -1.69	8e-7	■□□□□ 8.3
CALCOCO2-216	ENST00000509784	PTPRO	Q16827	1216 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	NKPD1	Q17RQ9	610 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PRSS53	Q2L4Q9	553 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	PLD6	Q8N2A8	252 aa	Known RBP	4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	TMEM145	Q8NBT3	493 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	DAGLB	Q8NCG7	672 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	KCTD13	Q8WZ19	329 aa		4.47	□□□□□ -1.69
CALCOCO2-216	ENST00000509784	UBE2F	Q969M7	185 aa		4.47	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms