RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 RIPK3Q9Y572 518 aa25.17■■□□□ 1.62
LIN54-208ENST00000509748 PFASO15067 1338 aa25.16■■□□□ 1.62
LIN54-208ENST00000509748 ATP2A1O14983 1001 aa25.16■■□□□ 1.62
LIN54-208ENST00000509748 EVI5O60447 810 aa25.16■■□□□ 1.62
LIN54-208ENST00000509748 MMP19Q99542 508 aa25.16■■□□□ 1.62
LIN54-208ENST00000509748 TEX13BQ9BXU2 312 aa25.16■■□□□ 1.62
LIN54-208ENST00000509748 SLC38A10Q9HBR0 1119 aa25.16■■□□□ 1.62
LIN54-208ENST00000509748 SLC5A4Q9NY91 659 aa25.16■■□□□ 1.62
LIN54-208ENST00000509748 TSPY2A6NKD2 308 aa25.15■■□□□ 1.62
LIN54-208ENST00000509748 PGK2P07205 417 aa25.15■■□□□ 1.62
LIN54-208ENST00000509748 BMP3P12645 472 aa25.15■■□□□ 1.62
LIN54-208ENST00000509748 COPB2P35606 906 aa25.15■■□□□ 1.62
LIN54-208ENST00000509748 ZNF792Q3KQV3 632 aa25.15■■□□□ 1.62
LIN54-208ENST00000509748 KIFC2Q96AC6 838 aa25.15■■□□□ 1.62
LIN54-208ENST00000509748 GMCL1Q96IK5 515 aa25.15■■□□□ 1.62
LIN54-208ENST00000509748 PRO3102Q9H379 93 aa25.15■■□□□ 1.62
LIN54-208ENST00000509748 RANBP6O60518 1105 aaKnown RBP25.14■■□□□ 1.62
LIN54-208ENST00000509748 PDE4AP27815 886 aa25.14■■□□□ 1.62
LIN54-208ENST00000509748 IRX6P78412 446 aaPredicted RBP25.14■■□□□ 1.62
LIN54-208ENST00000509748 PRAMEF19Q5SWL8 479 aa25.14■■□□□ 1.62
LIN54-208ENST00000509748 SNRNP48Q6IEG0 339 aaKnown RBP25.14■■□□□ 1.62
LIN54-208ENST00000509748 PLXNA1Q9UIW2 1896 aa25.14■■□□□ 1.61
LIN54-208ENST00000509748 SMCHD1A6NHR9 2005 aa25.13■■□□□ 1.61
LIN54-208ENST00000509748 ZBED4O75132 1171 aa25.13■■□□□ 1.61
LIN54-208ENST00000509748 CNGA1P29973 690 aa25.13■■□□□ 1.61
LIN54-208ENST00000509748 KCTD2Q14681 263 aa25.13■■□□□ 1.61
LIN54-208ENST00000509748 PPP4R3BQ5MIZ7 849 aa25.13■■□□□ 1.61
LIN54-208ENST00000509748 CHRDL2Q6WN34 429 aa25.13■■□□□ 1.61
LIN54-208ENST00000509748 STX8Q9UNK0 236 aa25.13■■□□□ 1.61
LIN54-208ENST00000509748 DIS3Q9Y2L1 958 aaKnown RBP25.13■■□□□ 1.61
LIN54-208ENST00000509748 TMEM232C9JQI7 657 aa25.12■■□□□ 1.61
LIN54-208ENST00000509748 MSCO60682 206 aa25.12■■□□□ 1.61
LIN54-208ENST00000509748 MCCP23508 829 aa25.12■■□□□ 1.61
LIN54-208ENST00000509748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.12■■□□□ 1.61
LIN54-208ENST00000509748 CPXCR1Q8N123 301 aa25.12■■□□□ 1.61
LIN54-208ENST00000509748 RAVER2Q9HCJ3 691 aaKnown RBP25.12■■□□□ 1.61
LIN54-208ENST00000509748 HAND2P61296 217 aa25.11■■□□□ 1.61
LIN54-208ENST00000509748 RASGRP2Q7LDG7 609 aa25.11■■□□□ 1.61
LIN54-208ENST00000509748 DNAH12Q6ZR08 3092 aa25.11■■□□□ 1.61
LIN54-208ENST00000509748 DNAJC25-GNG10A0A024R161 153 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 SEPT4O43236 478 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 PLA2G6O60733 806 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 SLC1A4P43007 532 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 OAZ1P54368 228 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 RCSD1Q6JBY9 416 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 CWC27Q6UX04 472 aaKnown RBP25.1■■□□□ 1.61
LIN54-208ENST00000509748 TBC1D10CQ8IV04 446 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 STAG1Q8WVM7 1258 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 CHMP4CQ96CF2 233 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 TINF2Q9BSI4 451 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 TCP11L1Q9NUJ3 509 aa25.1■■□□□ 1.61
LIN54-208ENST00000509748 RBM27Q9P2N5 1060 aaKnown RBP25.1■■□□□ 1.61
LIN54-208ENST00000509748 MFAP1P55081 439 aaKnown RBP25.09■■□□□ 1.61
LIN54-208ENST00000509748 ZNF536O15090 1300 aa25.09■■□□□ 1.61
LIN54-208ENST00000509748 FDX1P10109 184 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 FXR1P51114 621 aaKnown RBP eCLIP25.08■■□□□ 1.61
LIN54-208ENST00000509748 STAT2P52630 851 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 RRP12Q5JTH9 1297 aaKnown RBP25.08■■□□□ 1.61
LIN54-208ENST00000509748 AKNAD1Q5T1N1 836 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 ANO1Q5XXA6 986 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 KCTD1Q719H9 257 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 FAM160B2Q86V87 743 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 C7orf61Q8IZ16 206 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 CHURC1Q8WUH1 139 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 TOMM22Q9NS69 142 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 DIAPH3Q9NSV4 1193 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 NRBP1Q9UHY1 535 aa25.08■■□□□ 1.61
LIN54-208ENST00000509748 TAL1P17542 331 aaPredicted RBP25.07■■□□□ 1.6
LIN54-208ENST00000509748 SLC4A3P48751 1232 aa25.07■■□□□ 1.6
LIN54-208ENST00000509748 LRRC26Q2I0M4 334 aa25.07■■□□□ 1.6
LIN54-208ENST00000509748 TMEM47Q9BQJ4 181 aa25.07■■□□□ 1.6
LIN54-208ENST00000509748 CTDP1Q9Y5B0 961 aaPredicted RBP25.07■■□□□ 1.6
LIN54-208ENST00000509748 HIP1O00291 1037 aa25.06■■□□□ 1.6
LIN54-208ENST00000509748 PCP11498 1178 aaKnown RBP25.06■■□□□ 1.6
LIN54-208ENST00000509748 GSPT1P15170 499 aaKnown RBP25.06■■□□□ 1.6
LIN54-208ENST00000509748 MFSD6Q6ZSS7 791 aa25.06■■□□□ 1.6
LIN54-208ENST00000509748 CHST13Q8NET6 341 aa25.06■■□□□ 1.6
LIN54-208ENST00000509748 FGD4Q96M96 766 aa25.06■■□□□ 1.6
LIN54-208ENST00000509748 IL25Q9H293 177 aa25.06■■□□□ 1.6
LIN54-208ENST00000509748 DNM1LO00429 736 aa25.05■■□□□ 1.6
LIN54-208ENST00000509748 ZNF865P0CJ78 1059 aaPredicted RBP25.05■■□□□ 1.6
LIN54-208ENST00000509748 TOP1P11387 765 aaKnown RBP25.05■■□□□ 1.6
LIN54-208ENST00000509748 GJC2Q5T442 439 aaPredicted RBP25.05■■□□□ 1.6
LIN54-208ENST00000509748 TTC22Q5TAA0 569 aa25.05■■□□□ 1.6
LIN54-208ENST00000509748 MAMDC4Q6UXC1 1216 aa25.05■■□□□ 1.6
LIN54-208ENST00000509748 DDX11Q96FC9 970 aa25.05■■□□□ 1.6
LIN54-208ENST00000509748 AGBL1Q96MI9 1066 aa25.05■■□□□ 1.6
LIN54-208ENST00000509748 PRR12Q9ULL5 1215 aa25.05■■□□□ 1.6
LIN54-208ENST00000509748 ZMYND8Q9ULU4 1186 aaPredicted RBP25.05■■□□□ 1.6
LIN54-208ENST00000509748 SNAI1O95863 264 aaPredicted RBP25.04■■□□□ 1.6
LIN54-208ENST00000509748 MSL3Q8N5Y2 521 aaKnown RBP25.04■■□□□ 1.6
LIN54-208ENST00000509748 ARRDC4Q8NCT1 418 aa25.04■■□□□ 1.6
LIN54-208ENST00000509748 DCAF4Q8WV16 495 aa25.04■■□□□ 1.6
LIN54-208ENST00000509748 SENP6Q9GZR1 1112 aaPredicted RBP25.04■■□□□ 1.6
LIN54-208ENST00000509748 FBXO40Q9UH90 709 aa25.04■■□□□ 1.6
LIN54-208ENST00000509748 ISY1Q9ULR0 285 aaKnown RBP25.04■■□□□ 1.6
LIN54-208ENST00000509748 LAMA4Q16363 1823 aa25.04■■□□□ 1.6
LIN54-208ENST00000509748 NEDD4P46934 1319 aa25.04■■□□□ 1.6
LIN54-208ENST00000509748 SNAP25P60880 206 aa25.03■■□□□ 1.6
LIN54-208ENST00000509748 TTBK2Q6IQ55 1244 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms