RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TNMDQ9H2S6 317 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 CDC23Q9UJX2 597 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 R3HDM2Q9Y2K5 976 aaKnown RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 IKBKGQ9Y6K9 419 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 VWA3AA6NCI4 1184 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 TTC34A8MYJ7 566 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 E7ENQ6 273 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 AKR1B10O60218 316 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 PHACTR2O75167 634 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 TBCAO75347 108 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 ZNF202O95125 648 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 FAM107AO95990 144 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 ENDOUP21128 410 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 ARMCX5Q6P1M9 558 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 POTEEQ6S8J3 1075 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 C11orf74Q86VG3 221 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 ACMSDQ8TDX5 336 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 CLK4Q9HAZ1 481 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 MIS18AQ9NYP9 233 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 PCDHB2Q9Y5E7 798 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
PDLIM5-210ENST00000508216 PPP2R1AP30153 589 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 S100A5P33763 92 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 MATR3P43243 847 aaKnown RBP eCLIP11.98□□□□□ -0.492e-6■■■■□ 23.9
PDLIM5-210ENST00000508216 GEMIN4P57678 1058 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 PDE1BQ01064 536 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 ADAM9Q13443 819 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 STIM1Q13586 685 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 ZMYM1Q5SVZ6 1142 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 ESX1Q8N693 406 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 HAPLN3Q96S86 360 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 CABP1Q9NZU7 370 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 L3MBTL1Q9Y468 752 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 MYO5CQ9NQX4 1742 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 TRPM1Q7Z4N2 1603 aa11.98□□□□□ -0.49
PDLIM5-210ENST00000508216 ARHGAP6O43182 974 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 SLC34A2O95436 690 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 TGFB3P10600 412 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 HSPA8P11142 646 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 CPA3P15088 417 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 PRKAR2BP31323 418 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 STAT6P42226 847 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 SERPINB8P50452 374 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 VSNL1P62760 191 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 ALS2CLQ60I27 953 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 CCAR1Q8IX12 1150 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 LSMEM2Q8N112 164 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 ZNF473Q8WTR7 871 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 CTAGE1Q96RT6 745 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 LNPKQ9C0E8 428 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 VCXQ9H320 206 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 LRRC42Q9Y546 428 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 KDM6AO15550 1401 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 UGGT2Q9NYU1 1516 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 PFDN1O60925 122 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 PIP4K2BP78356 416 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 ALDH1L2Q3SY69 923 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 NEK10Q6ZWH5 1172 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 CLASRPQ8N2M8 674 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 RPGRIP1Q96KN7 1286 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 NEK1Q96PY6 1258 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 SIL1Q9H173 461 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 NDST4Q9H3R1 872 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 HAUS2Q9NVX0 235 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 RMND1Q9NWS8 449 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 SAMM50Q9Y512 469 aa11.97□□□□□ -0.49
PDLIM5-210ENST00000508216 NPHP4O75161 1426 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 GOLGA6L10A0A0M3HER8 536 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 A0A1B0GVL5 298 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 AGPSO00116 658 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 PEX14O75381 377 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 PARNO95453 639 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 SCTRP47872 440 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 SEPT7Q16181 437 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 STX1AQ16623 288 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 SLC44A4Q53GD3 710 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 KDM7AQ6ZMT4 941 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 Q6ZUG5 572 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 UBE3BQ7Z3V4 1068 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 CNBD1Q8NA66 436 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 ITPKCQ96DU7 683 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 FGD4Q96M96 766 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 SETDB2Q96T68 719 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 HNRNPABQ99729 332 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.49
PDLIM5-210ENST00000508216 FGD5Q6ZNL6 1462 aa11.96□□□□□ -0.5
PDLIM5-210ENST00000508216 TTC21AQ8NDW8 1320 aa11.96□□□□□ -0.5
PDLIM5-210ENST00000508216 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.5
PDLIM5-210ENST00000508216 BCL9O00512 1426 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms