RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 MYLIPQ8WY64 445 aa27.57■■■□□ 2
CALCOCO2-209ENST00000507076 RNPC3Q96LT9 517 aaKnown RBP27.57■■■□□ 2
CALCOCO2-209ENST00000507076 RIPK3Q9Y572 518 aa27.57■■■□□ 2
CALCOCO2-209ENST00000507076 MINDY4BA8MYZ0 360 aa27.56■■■□□ 2
CALCOCO2-209ENST00000507076 NDUFB10O96000 172 aa27.56■■■□□ 2
CALCOCO2-209ENST00000507076 RAG1P15918 1043 aa27.56■■■□□ 2
CALCOCO2-209ENST00000507076 MAFAQ8NHW3 353 aaPredicted RBP27.56■■■□□ 2
CALCOCO2-209ENST00000507076 CHMP4BQ9H444 224 aaKnown RBP27.56■■■□□ 2
CALCOCO2-209ENST00000507076 MKNK2Q9HBH9 465 aa27.56■■■□□ 2
CALCOCO2-209ENST00000507076 SYNRGQ9UMZ2 1314 aa27.56■■■□□ 2
CALCOCO2-209ENST00000507076 GSG1L2A8MUP6 293 aa27.55■■■□□ 2
CALCOCO2-209ENST00000507076 F5H6K3 240 aa27.55■■■□□ 2
CALCOCO2-209ENST00000507076 KIAA0355O15063 1070 aa27.55■■■□□ 2
CALCOCO2-209ENST00000507076 KLRC3Q07444 240 aa27.55■■■□□ 2
CALCOCO2-209ENST00000507076 SBK1Q52WX2 424 aa27.55■■■□□ 2
CALCOCO2-209ENST00000507076 CPXCR1Q8N123 301 aa27.55■■■□□ 2
CALCOCO2-209ENST00000507076 DDX11Q96FC9 970 aa27.55■■■□□ 2
CALCOCO2-209ENST00000507076 NYAP2Q9P242 653 aa27.55■■■□□ 2
CALCOCO2-209ENST00000507076 ZHX1Q9UKY1 873 aaPredicted RBP27.55■■■□□ 2
CALCOCO2-209ENST00000507076 SNAI1O95863 264 aaPredicted RBP27.54■■■□□ 2
CALCOCO2-209ENST00000507076 ACLYP53396 1101 aa27.54■■■□□ 2
CALCOCO2-209ENST00000507076 STARD7Q9NQZ5 370 aa27.54■■■□□ 2
CALCOCO2-209ENST00000507076 ECHDC1Q9NTX5 307 aa27.54■■■□□ 2
CALCOCO2-209ENST00000507076 TMEM39AQ9NV64 488 aa27.54■■■□□ 2
CALCOCO2-209ENST00000507076 SYNGAP1Q96PV0 1343 aa27.53■■■□□ 2
CALCOCO2-209ENST00000507076 OSBP2Q969R2 916 aa27.53■■■□□ 2
CALCOCO2-209ENST00000507076 FAM184BQ9ULE4 1060 aa27.53■■■□□ 2
CALCOCO2-209ENST00000507076 DNAJC25-GNG10A0A024R161 153 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 MYADML2A6NDP7 307 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 FPGSQ05932 587 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 C20orf194Q5TEA3 1177 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 TSHZ3Q63HK5 1081 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 DIEXFQ68CQ4 756 aaKnown RBP27.52■■■□□ 2
CALCOCO2-209ENST00000507076 MSL3Q8N5Y2 521 aaKnown RBP27.52■■■□□ 2
CALCOCO2-209ENST00000507076 KBTBD3Q8NAB2 608 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 PRPF38AQ8NAV1 312 aaKnown RBP27.52■■■□□ 2
CALCOCO2-209ENST00000507076 KIFC2Q96AC6 838 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 TSEN34Q9BSV6 310 aaKnown RBP27.52■■■□□ 2
CALCOCO2-209ENST00000507076 RAVER2Q9HCJ3 691 aaKnown RBP27.52■■■□□ 2
CALCOCO2-209ENST00000507076 EPB41L4AQ9HCS5 686 aaPredicted RBP27.52■■■□□ 2
CALCOCO2-209ENST00000507076 CLIP2Q9UDT6 1046 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 CDH23Q9H251 3354 aa27.52■■■□□ 2
CALCOCO2-209ENST00000507076 PRDM1O75626 825 aa27.51■■□□□ 1.99
CALCOCO2-209ENST00000507076 IRX5P78411 483 aaPredicted RBP27.51■■□□□ 1.99
CALCOCO2-209ENST00000507076 FAAP100Q0VG06 881 aa27.51■■□□□ 1.99
CALCOCO2-209ENST00000507076 GIMAP6Q6P9H5 292 aa27.51■■□□□ 1.99
CALCOCO2-209ENST00000507076 APPBP2Q92624 585 aa27.51■■□□□ 1.99
CALCOCO2-209ENST00000507076 RCAN3Q9UKA8 241 aa27.51■■□□□ 1.99
CALCOCO2-209ENST00000507076 CTDP1Q9Y5B0 961 aaPredicted RBP27.51■■□□□ 1.99
CALCOCO2-209ENST00000507076 ZBED4O75132 1171 aa27.5■■□□□ 1.99
CALCOCO2-209ENST00000507076 FOSL2P15408 326 aa27.5■■□□□ 1.99
CALCOCO2-209ENST00000507076 TDO2P48775 406 aa27.5■■□□□ 1.99
CALCOCO2-209ENST00000507076 KCNA10Q16322 511 aa27.5■■□□□ 1.99
CALCOCO2-209ENST00000507076 MAMDC4Q6UXC1 1216 aa27.5■■□□□ 1.99
CALCOCO2-209ENST00000507076 ANKRD33Q7Z3H0 272 aa27.5■■□□□ 1.99
CALCOCO2-209ENST00000507076 KLHDC9Q8NEP7 349 aa27.5■■□□□ 1.99
CALCOCO2-209ENST00000507076 NUP133Q8WUM0 1156 aa27.5■■□□□ 1.99
CALCOCO2-209ENST00000507076 PRUNE2Q8WUY3 3088 aa27.49■■□□□ 1.99
CALCOCO2-209ENST00000507076 IGKV6D-41A0A0C4DH26 115 aa27.49■■□□□ 1.99
CALCOCO2-209ENST00000507076 MOXD2PA6NHM9 499 aa27.49■■□□□ 1.99
CALCOCO2-209ENST00000507076 DCDC2CA8MYV0 355 aa27.49■■□□□ 1.99
CALCOCO2-209ENST00000507076 GPAA1O43292 621 aa27.49■■□□□ 1.99
CALCOCO2-209ENST00000507076 LRRC47Q8N1G4 583 aaKnown RBP27.49■■□□□ 1.99
CALCOCO2-209ENST00000507076 CEP95Q96GE4 821 aa27.49■■□□□ 1.99
CALCOCO2-209ENST00000507076 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.49■■□□□ 1.99
CALCOCO2-209ENST00000507076 LRRC37A2A6NM11 1700 aa27.48■■□□□ 1.99
CALCOCO2-209ENST00000507076 M0R2C6 588 aa27.48■■□□□ 1.99
CALCOCO2-209ENST00000507076 ATP2A1O14983 1001 aa27.48■■□□□ 1.99
CALCOCO2-209ENST00000507076 ADCY6O43306 1168 aa27.48■■□□□ 1.99
CALCOCO2-209ENST00000507076 CCSAPQ6IQ19 270 aaPredicted RBP27.48■■□□□ 1.99
CALCOCO2-209ENST00000507076 FGD4Q96M96 766 aa27.48■■□□□ 1.99
CALCOCO2-209ENST00000507076 TOX2Q96NM4 488 aa27.48■■□□□ 1.99
CALCOCO2-209ENST00000507076 RNF113AO15541 343 aaKnown RBP27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 DUSP11O75319 330 aaKnown RBP27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 APPP05067 770 aa27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 C6orf222P0C671 652 aaPredicted RBP27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 ACVR2BQ13705 512 aa27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 ZNF467Q7Z7K2 595 aaPredicted RBP27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 ZNF444Q8N0Y2 327 aaPredicted RBP27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 ANKRD35Q8N283 1001 aa27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 SLC38A10Q9HBR0 1119 aa27.47■■□□□ 1.99
CALCOCO2-209ENST00000507076 GPATCH3Q96I76 525 aa27.46■■□□□ 1.99
CALCOCO2-209ENST00000507076 FEM1BQ9UK73 627 aa27.46■■□□□ 1.99
CALCOCO2-209ENST00000507076 GBF1Q92538 1859 aa27.46■■□□□ 1.99
CALCOCO2-209ENST00000507076 TMEM265A0A087WTH1 108 aa27.45■■□□□ 1.98
CALCOCO2-209ENST00000507076 CCDC144BQ3MJ40 725 aa27.45■■□□□ 1.98
CALCOCO2-209ENST00000507076 ARMCX2Q7L311 632 aa27.45■■□□□ 1.98
CALCOCO2-209ENST00000507076 GLT1D1Q96MS3 346 aa27.45■■□□□ 1.98
CALCOCO2-209ENST00000507076 HOMER2Q9NSB8 354 aa27.45■■□□□ 1.98
CALCOCO2-209ENST00000507076 MTMR4Q9NYA4 1195 aa27.45■■□□□ 1.98
CALCOCO2-209ENST00000507076 TBX21Q9UL17 535 aa27.45■■□□□ 1.98
CALCOCO2-209ENST00000507076 ISY1Q9ULR0 285 aaKnown RBP27.45■■□□□ 1.98
CALCOCO2-209ENST00000507076 TIMP1P01033 207 aa27.44■■□□□ 1.98
CALCOCO2-209ENST00000507076 ASGR1P07306 291 aa27.44■■□□□ 1.98
CALCOCO2-209ENST00000507076 GNAT2P19087 354 aa27.44■■□□□ 1.98
CALCOCO2-209ENST00000507076 DNAJB2P25686 324 aa27.44■■□□□ 1.98
CALCOCO2-209ENST00000507076 CST5P28325 142 aaPredicted RBP27.44■■□□□ 1.98
CALCOCO2-209ENST00000507076 MKL1Q969V6 931 aa27.44■■□□□ 1.98
CALCOCO2-209ENST00000507076 VTI1AQ96AJ9 217 aa27.44■■□□□ 1.98
CALCOCO2-209ENST00000507076 ABHD16BQ9H3Z7 469 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms