RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 DPP9Q86TI2 863 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 NCAPG2Q86XI2 1143 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 LRRC47Q8N1G4 583 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 PRPF38AQ8NAV1 312 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 TRPV1Q8NER1 839 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 RILPL2Q969X0 211 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 INCENPQ9NQS7 918 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 IL17RBQ9NRM6 502 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 ZNFX1Q9P2E3 1918 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 RAD21O60216 631 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 COL6A1P12109 1028 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 FCER1AP12319 257 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 PDE4AP27815 886 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 HABP4Q5JVS0 413 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 PPP4R3BQ5MIZ7 849 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 SLFN13Q68D06 897 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 DPF3Q92784 378 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 TEX13BQ9BXU2 312 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 NBPF3Q9H094 633 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 SLC38A10Q9HBR0 1119 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 SLC5A4Q9NY91 659 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 FEM1BQ9UK73 627 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 TRIOBPQ9H2D6 2365 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 PFASO15067 1338 aa10.76□□□□□ -0.69
PDLIM5-209ENST00000506632 TSPY2A6NKD2 308 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 NMT2O60551 498 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 MSCO60682 206 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 BMP3P12645 472 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 GMCL1Q96IK5 515 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 MAML3Q96JK9 1138 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 MMP19Q99542 508 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 C11orf49Q9H6J7 331 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 DDX20Q9UHI6 824 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 DIS3Q9Y2L1 958 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 RIPK3Q9Y572 518 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 NR2E3Q9Y5X4 410 aa10.75□□□□□ -0.69
PDLIM5-209ENST00000506632 LAMA4Q16363 1823 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 PLXNA1Q9UIW2 1896 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 DNAJC25-GNG10A0A024R161 153 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 RANBP6O60518 1105 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 PLA2G6O60733 806 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 FDX1P10109 184 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 OAZ1P54368 228 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 MFAP1P55081 439 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 ZNF792Q3KQV3 632 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 SNRNP48Q6IEG0 339 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 STAG1Q8WVM7 1258 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 PRO3102Q9H379 93 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 TCP11L1Q9NUJ3 509 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 NRBP1Q9UHY1 535 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 STX8Q9UNK0 236 aa10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-209ENST00000506632 TMEM232C9JQI7 657 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 HIP1O00291 1037 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 EVI5O60447 810 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 ZBED4O75132 1171 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 PGK2P07205 417 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 PCP11498 1178 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 GSPT1P15170 499 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 MCCP23508 829 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 SLC1A4P43007 532 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 STAT2P52630 851 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 IRX6P78412 446 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 KCTD2Q14681 263 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 AKNAD1Q5T1N1 836 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 RCSD1Q6JBY9 416 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 CWC27Q6UX04 472 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 RASGRP2Q7LDG7 609 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 FAM160B2Q86V87 743 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 TBC1D10CQ8IV04 446 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 CHURC1Q8WUH1 139 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 KIFC2Q96AC6 838 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 RAVER2Q9HCJ3 691 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 ZNF536O15090 1300 aa10.73□□□□□ -0.69
PDLIM5-209ENST00000506632 SEPT4O43236 478 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 CNGA1P29973 690 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 HAND2P61296 217 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 TTC22Q5TAA0 569 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 CPXCR1Q8N123 301 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 MSL3Q8N5Y2 521 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 CHST13Q8NET6 341 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 TINF2Q9BSI4 451 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 DSCC1Q9BVC3 393 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 IL25Q9H293 177 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 DIAPH3Q9NSV4 1193 aa10.72□□□□□ -0.69
PDLIM5-209ENST00000506632 DNM1LO00429 736 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 ZNF865P0CJ78 1059 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 TOP1P11387 765 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 NEDD4P46934 1319 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 NT5C2P49902 561 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 RRP12Q5JTH9 1297 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 PRAMEF19Q5SWL8 479 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 MAMDC4Q6UXC1 1216 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 BTNL9Q6UXG8 535 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 MFSD6Q6ZSS7 791 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 KCTD1Q719H9 257 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 ZNF467Q7Z7K2 595 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 DCAF4Q8WV16 495 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms